Rhizobium sp. Pop5: NE852_04835
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Entry
NE852_04835 CDS
T11439
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE852_04835 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhip03019
]
NE852_04835 (groL)
03110 Chaperones and folding catalysts [BR:
rhip03110
]
NE852_04835 (groL)
03029 Mitochondrial biogenesis [BR:
rhip03029
]
NE852_04835 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhip04147
]
NE852_04835 (groL)
Enzymes [BR:
rhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NE852_04835 (groL)
Messenger RNA biogenesis [BR:
rhip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NE852_04835 (groL)
Chaperones and folding catalysts [BR:
rhip03110
]
Heat shock proteins
HSP60 / Chaperonin
NE852_04835 (groL)
Mitochondrial biogenesis [BR:
rhip03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NE852_04835 (groL)
Exosome [BR:
rhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NE852_04835 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NE852_04835 (groL)
Exosomal proteins of breast cancer cells
NE852_04835 (groL)
Exosomal proteins of colorectal cancer cells
NE852_04835 (groL)
Exosomal proteins of bladder cancer cells
NE852_04835 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UVD57532
LinkDB
All DBs
Position
complement(555753..557390)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITSKGINDDQEAGINIVRRALQAPARQIAENAGDEASIVIGKILDKDQDNWGYNA
QTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaaatcaagtttggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacattctcgccgatgcagtgaaggtcacgctcggcccgaagggccgtaacgtcatcatc
gacaagtccttcggtgcgccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgctggcgacggcacgacgaccgcaaccgttcttgcccaggcgatcgtt
cgcgaaggcgccaaggccgttgccgccggcatgaaccccatggacctgaagcgcggcatc
gatctcgccgttgccgaagtcgtcaaggatctccaggccaaggccaagaagatcaacacc
tcggaagaagtcgcccaggtcggcacgatctccgcaaacggcgagcgtcaggtcggtctc
gacattgccgaagccatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtgaccaacccggaaaagatgatcgccgatctcgaagacgtcttcatt
ctcctccacgagaagaagctttcgaacctgcagtcgatgctcccggttctcgaagccgtc
gtccagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagctcttgct
acgctcgtcgtcaacaagctgcgcggcggcctcaagatcgcagccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaccgtc
atctccgaagatctcggcatcaagctcgaaagcgtcacgctcgacatgctcggccgtgcc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtgttgcccagatcaaggctcagatcgaagaaaccacctccgactac
gaccgcgagaagctgcaggaacgccttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggcatcgtaccgggcggcggcgttgccctgctc
cgttcttccgtcaagatcacctccaagggtatcaacgacgaccaggaagccggcatcaac
atcgttcgtcgcgctctgcaggctccggctcgccagatcgctgaaaacgctggcgacgaa
gcttcgatcgtcatcggcaagatcctcgacaaggatcaggacaactggggttacaacgcc
cagaccggcgaatatggcgacatgatcggcatgggtatcatcgacccggttaaggtcgtt
cgcaccgcccttcaggatgccgcttccgttgcatcgctgctgatcaccaccgaagccatg
atcgccgaactgccgaagaaggacgctccggctatgccgggcggcatgggcggcatgggt
ggaatggacatgatgtga
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