Rhizobium sp. Pop5: NE852_06995
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Entry
NE852_06995 CDS
T11439
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NE852_06995 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhip03021
]
NE852_06995 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rhip03400
]
NE852_06995 (rpoZ)
Enzymes [BR:
rhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NE852_06995 (rpoZ)
Transcription machinery [BR:
rhip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NE852_06995 (rpoZ)
DNA repair and recombination proteins [BR:
rhip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NE852_06995 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
UVD57944
LinkDB
All DBs
Position
995353..995757
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGVAAADSEEQDDLPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcattgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctaatttcccagggtgcctcgatcaccatcgatcgc
gacaacgacaagaatcctgttgtggctctgcgcgagattgctgacgagacgctttcgccc
gatgacctcaaggaagacctgatccattcgctgcagaagcatgtcgaagtcgacgagccc
gagcccgatccggcaagcatgatcgccgccggtggcgttgccgcggccgacagcgaggag
caggacgacctgccggaaacgatcactttcgaccagatgtcggaagaagagctgcttgcc
ggcatcgaaggcctggtgccgccggaaaagagcgacgactactaa
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