KEGG   Rhizobium sp. Pop5: NE852_07630
Entry
NE852_07630       CDS       T11439                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rhip  Rhizobium sp. Pop5
Pathway
rhip00740  Riboflavin metabolism
rhip01100  Metabolic pathways
rhip01110  Biosynthesis of secondary metabolites
rhip01240  Biosynthesis of cofactors
rhip02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhip00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NE852_07630 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NE852_07630 (ribD)
Enzymes [BR:rhip01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NE852_07630 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NE852_07630 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UVD58064
LinkDB
Position
1123254..1124450
AA seq 398 aa
MGEGIAQPEDQRFMAAAIRLSRRHLGRTATNPSVGCVIVRDGFIVGRAVTALGGRPHAEP
QALAEAGELARGATAYVTLEPCSHHGKTPPCAEALIAYGVSRVVISVTDPDIRVSGRGIS
MLRNAGIEVTTGVLEEEGRRSLAGYLTRQTKNRPYVTLKLAVSADGMIGREGAGQVAITG
PQARAQVQALRAETDAILVGIGTAISDDPLLTVRTPGLEAQSPVRIVLDPLLALPLTSKL
VQTAREVPVIVVASEEVSLLRADAEGLPPSALPGISPTSGRAEEGVPPTDVGIQTRGTAL
EAAGVEIVYCSPYHPDVLLPALATRGISSLLIEGGAKTAKLFLEADLVDRIQLYQSPIVI
GDGGIESPLQATDIPSGFAHRGTYMFGADRLDEYEREN
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgggcgaggggatcgctcagcctgaggaccagcgcttcatggctgccgcgatccgtctt
tcgcgccggcatctcgggcgcactgccaccaatccatccgtcggctgcgtcatcgttcgc
gacggcttcatcgttggccgggccgtgaccgcgctcggcgggcgcccgcacgccgagccg
caggcgctcgccgaagcaggcgaactcgcccgcggcgccacggcctatgtcacgctcgaa
ccctgttcgcatcacggcaagacgccgccctgcgcggaggccttgattgcctacggcgtt
tcccgcgtcgtcatcagcgtaaccgaccccgatatcagggtttccggccgaggcatttcc
atgctgcgcaacgccggcatcgaggtaacgacgggtgtgctggaggaagagggcaggcgt
tcgctcgccggctatctcacccgccagacgaagaatcgcccttatgtgactctcaagctt
gccgtttccgctgacggcatgatcgggcgagagggggcagggcaggtggcgatcaccggc
ccgcaagcccgcgcccaggtccaggcgctgcgcgccgagacggatgcgattctggtcggg
atcggcacggcgatatcagacgatccgctgctgacggtgcggacaccaggtcttgaggcg
cagtcgcctgttcgtatcgtgctcgatcctcttctggcgctgccgctgacgagtaagctg
gttcagacggcgcgggaagtgccggtcatcgttgtcgcgagcgaggaagtatctttattg
cgggctgacgcggaaggcttacccccctctgccctgccgggcatctcacccacaagcggc
agggcagaggagggtgtcccacccaccgacgttggcattcaaacccgcggcaccgcgctc
gaagccgctggcgtcgaaatcgtctactgtagcccctatcatcccgatgtcctgctgccg
gcccttgccacacgcggcatttcctcgcttctcatcgagggcggcgcaaagaccgcgaag
cttttcctcgaagccgacctcgtcgaccgcatccagctctatcagtcgcccattgtcatc
ggcgatggaggtattgaatctccgttgcaggcaaccgacataccatccggtttcgcccac
cggggcacttatatgttcggcgctgatcgcctggatgaatatgaaagagagaattga

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