KEGG   Rhizobium sp. Pop5: NE852_09875
Entry
NE852_09875       CDS       T11439                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rhip  Rhizobium sp. Pop5
Pathway
rhip02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhip00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NE852_09875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhip02022]
    NE852_09875
Two-component system [BR:rhip02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   NE852_09875
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_2 AAA MCM FleQ AAA_16 P-loop_TraG ABC_tran nSTAND3
Other DBs
NCBI-ProteinID: UVD58461
LinkDB
Position
1560548..1561912
AA seq 454 aa
MASDILVVDDEHDIREIVSGILSDEGHETRTAHDSDSALAAISDRVPRLIFLDIWMQGSK
LDGLSLLDEIKTRHPDLPIVMISGHGNIETAVSAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKREVSELKRRTGDALELIGTSVAVSQLRQTIEKVSPTNSRIMILGASGSGKELVA
RMIHKKSSRANGPFVALNAANITPDRMEVALFGTEGTPGQARKIGALEEAHRGILYLDEV
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESRIAEGWFREDLYHRL
AVVPVRVPALAERREDIPFLVDQLMRQISEQAGIRPRRIGDDAMAVLQAHDWPGNIRQLR
NNIERLMILARTDGPDAPITADMLPTDLGDMLPKVSAKNDYHIMTLPLREAREMFEKDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcctctgatattctcgtcgtcgatgacgagcacgatattcgcgagatcgtttccggc
atcctctcggacgagggccatgagacgcgcacggcccatgacagcgacagcgcgcttgcg
gcgatttccgatcgcgtgccgcggctgatcttcctcgatatctggatgcaaggcagcaag
ctcgacggtctgtcgctgctcgacgaaatcaagacccgccatcctgatctgcctatcgtg
atgatttctggtcatggcaacatcgagaccgctgtctcggcgatcaagcgcggcgccttc
gatttcatcgagaaacctttcaaggccgaccggctgatcctcatcgccgaacgcgcgctg
gaaaattccaagctcaagcgcgaggtatccgagctgaagcgccgcaccggtgacgcactg
gaactgatcggcacctcggttgccgtttcacagctgcgccagacgatcgaaaaggtttct
ccgaccaacagccgcatcatgatcctcggcgcgtcgggctccggcaaggagctggtggcg
cggatgatccacaagaagtcgagccgcgccaacggccccttcgtcgcgctgaatgctgcc
aatattacgcctgaccgcatggaagtcgcgctcttcggcaccgagggtacgcccggccag
gcgcgcaagatcggcgcgctcgaggaggctcatcgcggcatcctttatctcgacgaggtc
ggcgagatgccgcgcgagacgcagaataagatcctgcgcgtgctcgtcgatcagcagttc
gaacgggtaggcggctccaagcgcgtcaaggtcgatgtccgcatcatttcctcgacggcc
tataatctggaaagccgcattgccgaaggctggttccgtgaggatctctatcatcgcctc
gcggtcgtgccggtgcgcgtgccggcgcttgcggagcggcgggaggacattcccttcctc
gtcgaccagctgatgcgccagatttccgagcaggccggcattcgtccgcgccgcatcggc
gacgacgccatggccgtgctgcaggcacacgattggccgggcaatatccgccagttgcgc
aacaacatcgagcgcttgatgattctggcccgcaccgatgggccggatgcgccgatcacc
gccgacatgctgccgaccgacctcggcgacatgctgccaaaggtttccgccaagaacgac
tatcacattatgacgctgccgctgcgcgaagcccgcgaaatgttcgagaaggattatctg
atcgcacagatcaaccgtttcggcggcaatatctcgcgcaccgccgaattcgtcggcatg
gagcgttcggcgctgcaccgcaagctgaagtcgctcggcgtctga

DBGET integrated database retrieval system