Rhizobium sp. Pop5: NE852_10845
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Entry
NE852_10845 CDS
T11439
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00550
Peptidoglycan biosynthesis
rhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NE852_10845
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhip01002
]
NE852_10845
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhip01011
]
NE852_10845
Enzymes [BR:
rhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NE852_10845
Peptidases and inhibitors [BR:
rhip01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
NE852_10845
Peptidoglycan biosynthesis and degradation proteins [BR:
rhip01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NE852_10845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
UVD58643
LinkDB
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Position
1761324..1762844
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AA seq
506 aa
AA seq
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MSRSVSSVSSSRSGSVFARLLAVLSVAVSIVLVDSISAEAEAANPKYAGIVVDAKTGNVL
YSENADRLQYPASLTKMMTLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTI
TVEQGILGLVTLSANDAATALGEMLGGGSEDRFGQLMTAKAHALGMTRTTYRNANGLPNT
AQMTTARDQARLGIALRQHFPQYYGYFSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYT
RAAGFNLVSSVQVDGKSIVGVVLGGASTPARDTQMRNLIATYLPKASSRGGSSALIAQAA
PAPAPAIIETPAPVEPPKAPQQVAKTITPAQPPVSAAVADLSLPHKGPQPDARYQVAETE
VAYTETAAPKTDNPLVTQAMPAPTKVKTKTFKPQAAAAAPAEDSDNAVDNVTTASTSPTT
AKDGPAGWVVQVGVSPSRQMAMDLLDSAKNKGGKALASAKPFAVAYGAGNDQVYRARFGG
FDDQRDAVNACKALKKAGVKCWAAAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaggtcagtctcctccgtatcatcgtcccgatctggcagcgttttcgcaaggctg
ttagcggtcctttcggtggccgtcagcatcgtgctggtcgattcgattagtgccgaagcg
gaagcggcaaatccgaaatatgcgggcatcgtcgtcgacgccaagaccggtaacgttctc
tacagcgagaatgccgaccggctgcaatatccggcctcgctgaccaagatgatgaccctt
tatatgaccttcgaggcgctggagcagggtcgcatccgtctcgatacgccggtccccttc
tccgctcatgctgcagcccaggcgccgaccaagcttggtgtgcgcgccggcggcacaatc
accgtcgaacaaggtattctcggtctcgtcacgctttcggccaatgatgccgctaccgct
ctcggcgagatgctcggcggcggcagcgaggatcgctttggccagttgatgaccgccaag
gcgcatgcgctcggtatgacgcgcaccacctaccgcaatgccaacggtctgccgaacacg
gcgcagatgacgacggcgcgcgatcaggcgcgtctcggcatcgctcttcgccagcatttt
ccgcaatattacggttatttctccacccgcgccttcaagttcggcacccgcacgatccgc
agccataaccgcctggtcggttccgtgcgcggcgtcgacggcatcaagaccggttatacc
cgggctgccggcttcaatcttgtgagctcggtgcaggtggacggcaagtcgatcgtcggt
gttgtcctcggcggcgcatcgacgcccgcccgcgacacccagatgcgcaacctgattgcg
acctacctgccgaaggcttcgagccgcggcggctcctcggcgctgatcgcccaggcagcc
cctgccccggcgccggcgatcattgaaacgcccgctccggtcgagccgccgaaggctccg
cagcaggtcgcaaaaacgatcacaccagcacagccgccggtttcggccgccgtcgctgat
ctaagcctgccgcacaagggaccgcagccggatgcgcgctatcaggtcgccgagaccgag
gtggcctacaccgaaaccgctgcgccgaagaccgacaatccgctggtgacccaggcaatg
cccgcgccgaccaaagtcaagaccaagaccttcaagccgcaggctgctgccgcggcccca
gccgaagacagcgataacgccgtcgacaacgtcacgaccgcgtcgaccagcccgaccacg
gccaaagacgggccggccggctgggtcgtgcaggtcggcgtttcgccgagccggcagatg
gccatggacctcctggatagcgccaagaacaagggcggcaaggcgctggcctcggcgaaa
cccttcgcagtcgcctatggggccggcaatgatcaggtgtaccgcgctcgcttcggtggc
ttcgacgatcagcgcgacgccgtcaacgcctgcaaggccttgaagaaggccggcgtcaag
tgctgggccgccgcccaatga
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