Rhizobium sp. Pop5: NE852_10970
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Entry
NE852_10970 CDS
T11439
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rhip Rhizobium sp. Pop5
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhip03009
]
NE852_10970
Enzymes [BR:
rhip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NE852_10970
Ribosome biogenesis [BR:
rhip03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NE852_10970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2332
Motif
Other DBs
NCBI-ProteinID:
UVD58666
LinkDB
All DBs
Position
complement(1782619..1783611)
Genome browser
AA seq
330 aa
AA seq
DB search
MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQVRVDGGRVKSDARVQPGQ
TVRVPPLDVDAKLKSGPIAGKDLKHSTDFDLLSRMVLHEDEKVIVLNKPPGLAVQGGSGV
ARHIDQMLEAWTSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTYWS
LVRGVPRKHEDKISTWLVKEPTADGDRMRIAKHGEEGADHAVSFYRVLETAAQNLAWLEM
EPYTGRTHQLRVHALHIGHPIIGDPKYFIDDPNWDFPGGIQKRLHLHARHIDIPHPSGGR
LRVSAPLPPHMVQTWNLLGFDLSNAEMDDE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatagaacatatcaaggttgaacctgacgaggcgggcatgcggctcgatcgc
tggttcaaagtgcattttcccgggctcggcttcgggccgctccagaagctcctgcgctcc
ggccaggtgcgtgtcgacggcggacgggtgaaatcggatgcgcgcgtgcagcccggccag
acggtgcgcgtgccgccgctcgatgtcgatgcgaaactgaaatccggaccgatcgccggc
aaggatctcaagcattccacagatttcgacctgctgtcgcgcatggtgctgcacgaggat
gaaaaggtaatcgtgctcaacaagccgcccggcctagccgtacaaggcggctccggcgtc
gccaggcatatcgatcagatgctcgaagcctggaccagcccgaagggcgagaagccgcgg
ctcgtccaccgcctcgaccgcgatacatcgggcgttctcgtcatcgcccgcacccgcggc
gccgcgcagaagctgacggccgctttccgcgaacgcgacacgaagaagacctactggtca
ctggtcaggggcgtgccgcgcaagcacgaggacaagatttcgacctggctcgtgaaggaa
cccactgccgatggcgaccgcatgcgcatcgccaagcacggcgaagaaggcgccgatcac
gccgtctccttctaccgcgtgctcgaaaccgccgcccagaacctcgcctggctcgagatg
gagccctataccggccgcacccaccagctgcgtgtgcacgcgctgcacatcggccatccg
atcatcggcgatccgaaatatttcatcgacgatccgaactgggattttccgggcggcatc
caaaagcgcctgcatctgcatgcgcgtcacatcgatattccgcacccttccggtgggcgc
ctgcgcgtcagcgcgccgctgccgccgcatatggtgcagacctggaatctcctcggcttc
gatctttccaacgctgaaatggacgacgaatga
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