Rhizobium sp. Pop5: NE852_12660
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Entry
NE852_12660 CDS
T11439
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NE852_12660 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhip03400
]
NE852_12660 (uvrB)
DNA repair and recombination proteins [BR:
rhip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NE852_12660 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NE852_12660 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
SWI2_SNF2
DUF2963
Microtub_bd
UB2H
Motif
Other DBs
NCBI-ProteinID:
UVD58981
LinkDB
All DBs
Position
2120915..2123917
Genome browser
AA seq
1000 aa
AA seq
DB search
MAKSPKKSPAPNGFEEAPQSSFEGAPLSGSVADWVKQLEADAEAAGVESQREIASKAGKH
RKKVENEARKHAEAVSVNKKATVSKTARGVSIGGSSDPKTRAAAGLNPVAGLDISLEDAG
NLAPGGVTATVEALSKLIESGNPLHKNGKIWTPHRPARPDKSEGGITIRMDSEYKPAGDQ
PTAIRDLVEGLENGDRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEF
KNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCI
IVASVSCIYGIGSVETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMDFTRGSFRVRG
DTIELFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKVGDLKSVKIYANSHYVTPRPTLN
GAIKAIKEELRLRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRD
PGDPPPTLFEYIPDNAIVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPL
RFEEWDAMRPDTIAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDDVLG
EIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAF
DVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNV
TGSMKRAMEETGRRREKQMAYNLENGITPESVKAKISDILDSVYERDHVRADISGVSGKG
FADGGNLVGNNLQTHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELAVMDDPMARE
ESKAMEGIKRNAKATRESLPPSGGKVPGRADEGATPSYFSKPSLDDMGPGTDTTTPLFRK
PDLDDMGRDIAEPAKKSLFRKNDLDEMTVGRTEKPVIGHVPEKPEASKGTKRFSPLLEGQ
PERDDVRPVVRGKTGVGSYEDPGEQKRKGRTKGKTGRPGR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctccgaagaaatcccccgccccgaatggcttcgaggaagccccgcaatcg
tctttcgagggagcccccctgtccggctcggttgccgattgggtgaagcagctggaggcg
gatgccgaggcggcgggcgtcgaaagccagcgcgaaattgcctccaaggcgggcaagcac
cgcaagaaggtggagaacgaggcacgcaagcatgccgaagccgtcagcgtcaacaagaag
gcaacggtcagcaagactgcgcgcggcgtttccatcggcggctcctccgacccgaagacc
cgcgccgccgccggcctcaatccggttgccggcctcgatatttcccttgaggatgccggc
aacctcgcaccgggcggcgtcaccgccacggtggaggcgctgtcgaagctgatcgaaagc
ggcaatccgctgcacaagaacggcaagatctggacgccgcaccgccctgcccgcccggac
aaatccgaaggcggcatcaccatccgcatggactccgaatacaagccggccggcgaccag
ccgacggcgatccgcgatctcgtcgagggcctggagaatggcgaccgcagccaggtgctg
ctcggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaggcgacgcag
cgcccggccgtcatcctggcgccgaacaagacgctggccgcccagctctattccgaattc
aagaacttcttccccgacaatgcggtggaatatttcgtttcctactacgattattaccag
ccggaagcctatgtgccgcgctccgacacctatatcgagaaggaaagctcgatcaacgag
cagatcgaccgcatgcgccactcggcgacgcgctcgctgctcgaacgcgacgactgcatc
atcgtcgcctcggtctcctgcatctatggtatcggctcggtcgagacctatacggcgatg
accttccagatgaatgtcggcgaccggctggaccagcgccagctgctggccgacctcgtc
gcccagcaatacaagcgccgcgacatggatttcacccgcggctccttccgtgtgcgcggc
gacacgatcgagctctttccggcccacctggaggatgccgcctggcgcatctccatgttc
ggcgacgagatcgattccatcaccgaattcgatcccctgaccggccagaaggtcggcgac
ctgaaatcggtgaagatctacgccaattcgcactatgtcacgccgcgcccgacgctgaac
ggcgccatcaaggcgatcaaggaagaactgcggctgcgcctcgccgaactggagaaggcc
ggccgcctgctggaggcccagcgcctggagcagcgcacccgctacgacatcgagatgctg
gaagccaccggctcctgccagggcatcgaaaactattcgcgctatctcaccggccgcgac
cccggcgatccgccgccgacgctgttcgaatacatccccgacaacgccatcgtcttcatc
gacgaaagccatgtcaccgtgccgcagatcggcggcatgtaccggggcgacttccgccgc
aaggcgacgctggccgaatacggcttccgcctgccctcctgcatggacaaccggccgctg
cgcttcgaggaatgggacgcgatgcgccccgacaccatcgccgtttcggccaccccgggc
ggctgggagatggaacaatccggcggcgtcttcgccgaacaggtgatccgccccaccggc
ctgatcgacccgccggtcgaggtccgctccgcccgcacccaggtcgacgacgtgctcggc
gagatccgcgaaaccgccgccaagggctaccgcacgctctgcaccgtgctgaccaagcgc
atggccgaagacctcacggaatatctgcatgaacagggcgtgcgcgtgcgctacatgcac
tccgacatcgacacgctggagcgtatcgaaatcatccgcgatctccgcctcggcgccttc
gacgtgctcgtcggcatcaacctgctgcgcgagggcctcgacattcccgaatgcggcttc
gtcgccattctcgacgccgacaaggaaggcttcctgcgctcggagacgtcgctgatccag
accatcggccgcgccgcgcgcaacgtcgacggcaaggtcatcctctatgccgacaacgtc
accggctcgatgaagcgggcgatggaggaaaccggccgccgccgcgaaaagcagatggcc
tataacctcgaaaacggcatcacgccggaatccgtcaaggccaagatctccgacatcctc
gactctgtctacgaacgcgaccacgtccgcgctgatatctcaggcgtttcgggcaaaggc
ttcgccgatggcggcaacctcgtcggcaacaacctgcaaacccatctcaatgcgctcgaa
aaaagcatgcgtgacgccgccgccgacctcgacttcgaaaaagccgcccgcctccgcgac
gaaatcaaacgcctcaaggccgccgaactcgccgtcatggacgacccgatggcgcgcgaa
gagtcgaaggcgatggaaggcatcaagcggaacgccaaggcgacccgcgagtcccttccc
cccagcggggggaaggtgcccggcagggcggatgagggggccacaccctcctacttctcc
aaaccctccctcgacgacatgggcccaggcaccgacacgaccacgcccctcttccgcaaa
ccggatctggacgacatgggccgcgacatcgccgaacccgcaaagaagagcctcttccgc
aaaaacgacctcgacgaaatgaccgtcggccgaacggaaaaaccggtcatcggccacgtg
ccggaaaagccggaagcatcaaagggcacgaagcggttttcgccgctgttggagggccag
ccggaacgcgatgacgtgcggccggtcgtgcgcgggaagacgggtgtcggaagctatgag
gacccgggcgagcagaagcgcaagggacggacgaaggggaagaccgggcggccgggcaga
taa
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