Rhizobium sp. Pop5: NE852_14955
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Entry
NE852_14955 CDS
T11439
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00470
D-Amino acid metabolism
rhip00550
Peptidoglycan biosynthesis
rhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NE852_14955 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NE852_14955 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhip01011
]
NE852_14955 (murD)
Enzymes [BR:
rhip01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NE852_14955 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhip01011
]
Precursor biosynthesis
Amino acid ligase
NE852_14955 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
2-Hacid_dh_C
MurD-like_N
KARI_N
NAD_binding_2
TrkA_N
NAD_binding_7
F420_oxidored
CbiA
Motif
Other DBs
NCBI-ProteinID:
UVD55393
LinkDB
All DBs
Position
complement(2564847..2566259)
Genome browser
AA seq
470 aa
AA seq
DB search
MIPVTTLKDRKVALFGLGGSGFATARALIAGGADVTAWDDNPDSVAKASAEGIRTEDLHT
IDWSQQALFVLSPGVPLTHPKPHWTVDLARAAGVDIVGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSAGYDTQLGGNIGTAVLTLDPPKAGRYFVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTMQHYADVKERLVAGSDVAIVGIDDSHSALIADRVERAGVT
VVRISRRNVVASGIYAEGTKLVQAAGGAMLPFADLDGIQTLRGNHNAQNAAAAVAACLAV
GVSAAEIRAGLASFPGLKHRMQPVGRRGRVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKSGGITTLAPYFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLERAVAHAAADVERD
EAAAAVVMLSPACASFDQYKNFEVRGDAFVSHVAALDGMTMLIGPATGEK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacgacgctcaaggacaggaaggtcgcgctcttcgggctcggcggctcc
ggttttgccaccgcccgcgcgctgatcgcgggcggcgccgacgtgactgcctgggacgac
aatcccgacagcgtcgccaaggcttcggcggaaggcatccggacggaggatctgcacacg
atcgactggagccagcaggcgctgttcgtgctgtcgcccggcgtgccgctcacccatccg
aagccgcactggaccgtcgatcttgcgcgggcggcgggcgtcgacatcgtcggcgatgtc
gagctcttcgtgcgcgagcgccgcgcccatgcgcctgattgccccttcatcgccatcacc
ggcaccaatggcaagtcgacgacgacggcgctgatcgcccacatcctgaaatccgcgggc
tacgacacgcagctcggcggcaatatcggcacggcggtgctgacgctcgatccgccgaaa
gcgggccgttatttcgtcgtcgaatgctcttcctaccagattgatctcgcgccgacgctg
aacccttccgccggtatcctgctcaacctgacgcccgatcatctcgaccgtcacggcacc
atgcagcattatgccgacgtcaaggagcgcctggtcgccggcagcgacgtggcgatcgtc
ggcatcgatgacagccattcggcgctgatcgccgaccgcgtcgagcgggcaggcgtcacc
gtggtccgcatttcgcgccgcaacgtggtggcgtcgggcatctatgccgagggcacgaaa
ctcgttcaggccgccggcggcgccatgctaccttttgccgatctcgacggcatccagacg
ctgcgcggtaaccacaacgctcagaacgccgcagccgccgtcgccgcctgccttgccgtc
ggcgtttccgcggccgagatccgcgccggccttgcttcgtttcccggtctcaaacaccgt
atgcagcctgtcggcagacgcggccgcgtggttttcgtcaacgattccaaggcgaccaat
gccgatgccgcggcgcccgcgctttcgagctatgatcgcatctactggattgccggcggc
ctgccgaaatcaggcggcatcacaacactcgcgccctatttcccgcgcatcgccaaggcc
tatctgatcggcgaggcggcggcggaatttgccgcgaccctcggcgaggccgtgccttac
gagatatcaggcacgctggagcgggcggttgcgcatgcggcggcggatgtggagcgcgac
gaggctgccgctgccgtcgtgatgttatccccggcttgcgcaagcttcgaccagtataag
aacttcgaagtcaggggcgatgcctttgtcagccacgtggcggcacttgacggaatgacg
atgctgatcggtccggcaacaggagagaaatga
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