Rhizobium sp. Pop5: NE852_16185
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Entry
NE852_16185 CDS
T11439
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NE852_16185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_16185
Transporters [BR:
rhip02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NE852_16185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
NMT1
Zea_mays_MuDR
Motif
Other DBs
NCBI-ProteinID:
UVD55621
LinkDB
All DBs
Position
2807174..2808130
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AA seq
318 aa
AA seq
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MKTTSAFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIG
YQTDIKVLSVPVTYTSLKNKDIDIFLGNWMPTQEKDVRPYIDDKSVESFGPNLVGAKYTL
ATNAKGAELGIKDFKDVAAHKDDLDGKIYGIEPGNDGNRLIMDMIEKNTFGMKEMEVVES
SEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDIFGPDFGGAKVYTNVRA
GYLNDCPNVGAMLKNMTFSLEMENQIMGKILDDGKEPEAAATEWLKANPSALGPWLAGVK
TRDGKGDALAAAKTGLGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacaagcgcattcaaacttgtcactgcaactgccgtcgccgccctctccgtt
gcgactgccgccttcgccgccgatcctgacagctgctccaccgtccacttctcggatgtc
ggctggactgatattaccgccaccacggccacggcctccgtcgtcctgaaaagcatcggc
tatcagacggacatcaaggttctctccgtgccggttacctacacctcgctgaagaacaag
gacatcgacatcttcctcggcaactggatgccgacgcaggaaaaggacgtccgtccctat
atcgacgataagtcggtcgaatccttcggccccaacctcgtcggcgccaagtacacgctc
gccaccaatgccaagggtgccgagctcggcatcaaggacttcaaggatgtcgccgcccac
aaggacgatctcgacggcaagatctatggcatcgagcccggcaatgacggcaaccgcctg
atcatggacatgatcgaaaagaacaccttcggcatgaaggagatggaagtcgtcgaatcc
tccgaacagggcatgctcgcccaggtcgcccgcgctgaaaaggctggcaagcccgttgtt
ttcctcggctgggaaccccatccgatgaacaccaacttcaagctgacctacctcaccggc
ggtgacgatatcttcggacccgatttcggcggcgccaaggtctacaccaacgtccgcgcc
ggctatctcaacgattgcccgaatgtcggggcgatgctgaagaacatgacgttctccctc
gagatggagaaccagatcatgggcaagatcctcgacgacggcaaggagccggaagctgcg
gccaccgaatggcttaaggccaatccttccgccctcgggccctggctcgccggcgtcaag
acccgcgacggcaagggcgacgcactggcggctgccaagaccggcctcggcctttga
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