Rhizobium sp. Pop5: NE852_16590
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Entry
NE852_16590 CDS
T11439
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NE852_16590 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_16590 (xylF)
Transporters [BR:
rhip02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
NE852_16590 (xylF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DUF6856
DHQS
Motif
Other DBs
NCBI-ProteinID:
UVD55700
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All DBs
Position
2896345..2897385
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AA seq
346 aa
AA seq
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MKSIYKLMAGAAILVSVHTVAMAKDLVVGVSWSNFQEERWKTDEAAIKKALEAKGAKYIS
ADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAIEKAAAEGIPVVGYDRLIENPA
AFYITFDNKEVGRLQAQGVFKAKPEGNYVFIKGSSSDPNADFLFSGQQEVLKAAIDAGKI
KNVGEAYTDGWLPENAQRNMEQFLTANNNKVDAVVASNDGTAGGAIAALDAQGLAGSVPV
SGQDGDKAALNRIALGTQTVSVWKDSRELGKRAAEIALDLAGGKDMSKIDGAQTFKGGPK
HVEMNSVFLKPLAITKENLNVVIDAGWISKAEACQGVKAGTVAACK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctatttataagctgatggcaggcgctgccatcctcgtttccgtgcataccgtt
gccatggctaaagacctcgtcgtcggcgtttcctggtcgaatttccaggaagagcgctgg
aagacggacgaagccgccatcaagaaggctctcgaagccaagggcgccaagtatatttcc
gctgacgcacagtcctcagccgcaaagcagctcaccgacgtcgaatcgctgatctcgcag
ggcgccaacgcgctcatcattctcgcccaggactccgacgcgatcggcccggccatcgaa
aaggccgctgctgaaggcattccggtcgtcggctacgaccgcctgatcgaaaacccggcg
gccttctacatcaccttcgacaacaaggaagtcggccgcctgcaggctcagggcgtcttc
aaggccaagccggaaggcaactacgtcttcatcaagggctcgtcctccgacccgaacgca
gacttcctgttctcgggccagcaggaagtgctgaaggccgcgatcgacgccggcaagatc
aagaatgtcggcgaagcctataccgacggctggctgccggagaatgctcagcgcaacatg
gagcagttcctgaccgccaacaacaacaaggttgatgccgttgttgcttcgaacgacggc
acggccggcggcgcgatcgcagcgctcgacgcccagggcctcgccggttcggttccggtt
tccggccaggacggcgacaaggcagcactcaaccgcatcgctctcggcacccagacggtt
tccgtctggaaggacagccgcgaactcggcaagcgcgctgctgaaatcgctctcgacctc
gccggcggcaaggacatgagcaagatcgacggcgcccagaccttcaagggcggcccgaag
cacgtggaaatgaactcggtcttcctgaagccgctggcgatcaccaaggaaaatctgaac
gtcgtcatcgacgccggctggatttccaaggctgaagcctgccagggcgtcaaggccggc
actgtcgctgcgtgcaagtaa
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