Rhizobium sp. Pop5: NE852_18285
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Entry
NE852_18285 CDS
T11439
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
rhip Rhizobium sp. Pop5
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_18285
Transporters [BR:
rhip02000
]
Other transporters
Pores ion channels [TC:
1
]
NE852_18285
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
UVD56011
LinkDB
All DBs
Position
complement(3267444..3269555)
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AA seq
703 aa
AA seq
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MGRGAAVGLKGSISGILAFLILLGVASSAFAQTSQAPAAAATPPAQVREMMQLMQTPEVK
QWMSTQMAATPAAAAASENQMSILSGLLQHARRHVSMVSDAAMTLPSQIGNASSLFFGEI
AANGRQRMAAQFLAIFLLGGIVESIARYTFRRRRRRLTAMAGMHLAPRVIPALVFAAATV
FTLLSFGWPPISQNIAIVCVVALIVQRFTISLGGVMVDLIGLARAEEERQGVPAPTMPGR
AVALFWYRRCAIFVIYFVFGWAVIQSTEPLGYSQSARLLIGYFLGIGLLLIAIEAVWSRP
DKDEKRGHGISWAFTVYFLLLWSIWVAGFNWLLWLGIYALLLPRVLAVSTLAVKSLQQTE
ASFLATRRIATVLLDRGVRALIIAFAAIWLGRMLGVGADTMAAGDTMVDKIARGVIGGVV
ILLAADLFWHVVKAFIDGQLLDSPLDGAATDEEKAKRARMQTLLPIFRNILAVVIAVIAA
LMVLSGLGIEIGPLIAGAGVVGVAVGFGAQTIVKDVISGMFYLWDDAFRVGEYIESGSHK
GVVEAFSLRSVKLRHHRGPLTTVPFGELGAVKNLNRDWTIDKISLNVKYDTDLVKAKKVI
KQIGQTLLDNPEFGPHIIETLKMKGVEQFGEFAIEIRLSMMTKPGEQFVIRRNALAMIRN
AFKENGIEFAVPTVQVAGDRDADLDAAVARYAAHARAGGEPAA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtggtgcggcagtgggcttgaaaggctccatatcgggcatattagcattcctc
atactattgggggtggcttcctcagctttcgcccaaacatcgcaagcgccggccgcggcc
gccacgccgccagcgcaggtgcgtgaaatgatgcagctcatgcagacgcccgaggtcaag
cagtggatgtcgacgcagatggcagcgacgcccgctgccgctgccgcgtctgaaaatcag
atgtcgatcctgtccgggctgctgcagcatgcccgccggcacgtctcgatggtttccgat
gcggcgatgacattaccctcgcagatcggcaatgcgtcctcgctgttcttcggggaaatc
gcggccaacggccggcagcgcatggcggcacagttcctggcgatcttcctgctcggcggg
atcgtcgaaagcattgcccgttatacctttcgccgccgtcgtcgccggctgactgcgatg
gccggcatgcatctggcgccgcgcgtcattccggcgctggtcttcgcggcggcaacggtg
tttacgcttctgagcttcggttggccgccgatcagccagaacatcgcgatcgtctgcgtc
gtcgcgctgatcgtccagcgttttacgattagcctcggcggggtgatggtcgatctcatc
gggctggccagggccgaagaggagcggcagggcgtccccgctccaaccatgccagggcgc
gctgtcgcactcttctggtatcgccgctgcgcgatcttcgttatctatttcgttttcggc
tgggcggtgatccagtcgacggagccgctcggctattcccagagcgcccggctcctgatc
ggttatttcctcggcatcggtctgctgctgatcgcgatcgaggcggtctggtcgcggcct
gacaaggacgagaagcgcggtcacgggatatcctgggcgttcaccgtctatttcctgctg
ctgtggagcatttgggtcgcaggcttcaattggctgctctggctcggcatctatgcgctg
ctgctgccgcgcgtgcttgcggtttcgacgcttgcggtgaagtcgctgcagcagactgaa
gcgagcttccttgccacgcgccgcattgcgacggtgctgctcgaccgcggtgtgcgggcg
ctgatcatcgcctttgccgccatctggctcgggcggatgctgggcgtcggtgccgacacg
atggccgccggcgatacgatggtcgacaaaatagcccgcggggtcatcggcggcgtcgtc
atcctgctggcggccgatctgttttggcacgtcgtcaaagcctttatcgacggccagttg
ctcgactcgccgctcgacggtgccgcgacggacgaggagaaggccaaacgcgcgcgaatg
cagacgctgctgccgatcttccgcaacatcctcgccgtggtcatcgccgtcatcgccgct
ctgatggtgctttcgggcctcggcatcgagatcggtccgctgatcgccggtgccggcgtc
gtcggcgttgcggtcggcttcggcgcgcagacgatcgtcaaggacgtcatcagcggcatg
ttctatctctgggacgatgccttccgcgtcggcgaatatatcgaaagcggcagccacaag
ggtgtggtcgaagccttcagcctgcgctcggtgaagctcaggcatcatcgcggcccgttg
acgacggtgccgttcggcgaactcggcgcggtgaaaaacctcaaccgcgactggacgatc
gacaagatcagcctcaacgttaaatacgacaccgatctcgtcaaggcgaagaaggtgatc
aaacagatcggccagacgctgctcgacaatccggaattcggaccgcatatcatcgagact
ctgaagatgaagggtgtcgagcaattcggcgaattcgcgatcgagatccgcttgtcgatg
atgacgaagcccggcgagcaattcgtcatccgtcgcaacgcgctggcgatgatccgcaat
gccttcaaggaaaacggcatcgaattcgccgtgccgaccgtgcaggtggcgggcgatcgc
gatgcggatctcgatgctgccgttgcacgctatgctgcgcacgcgcgggccggcggcgag
ccggccgcgtga
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