Rhizobium sp. Pop5: NE852_18920
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Entry
NE852_18920 CDS
T11439
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00500
Starch and sucrose metabolism
rhip01100
Metabolic pathways
Module
rhip_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NE852_18920 (glgX)
Enzymes [BR:
rhip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
NE852_18920 (glgX)
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Motif
Pfam:
CBM_48
Alpha-amylase
AtzH-like
Glyco_hydro_42C
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
UVD56131
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Position
3409217..3411187
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AA seq
656 aa
AA seq
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MRDSNSARGAIVFETGVEFAAWSHHAAQIELCLFEDDGNREFARLPMARDGNHIHRLFVD
GLRQGARYGYRADGIYAPDNGLWFDPSKLLTDPYAKEIDRPFRYDPRLGIYGEDSQDLMP
KAIVTTDTPAAIEKPLFKPGGFIYEVAVRPFTILHPDVPEAQRGTVAALAHPSVIAHLKR
IGVDAVELMPITAWIDERHLPPLGLTNGWGYNPVGLMALDPRLVPGGMAELRETVAALHA
EGIAVILDLVFNHTGESDRYGATLSLRGLDNLHYYRHAQNSPGELVNDTGTGNTIACDHP
EVRRLVIDSLRHFVLNAGVDGFRFDLAPVLGRTATGFEPNGTLAAILADDVLADRVMIAE
PWDIGPGGYQLGNFPRPFLEWNDRVRDDLRCYWRGDQWKTGSLATALAGSSDIFSRNDGK
DTRSVNFLAAHDGFTLIDLVSYAGKHNDANGEHNRDGHNENHSWNNGVEGETHYPSIRKR
RINDVMALISTLFATRGSIMLTAGDEGGRSQRGNNNAYCQDNEITWLDWKTLNEDLVAHT
AFVSGLRRRFTAFWETGFLSGDGDVEWISLSGEAMTVAEWETPSLSTLGMLLATSDRSSR
GEQTRLAVLFNRSDSRQIFTLPSKGEAWRQLTPEGTKKAGADVTVEPRSVAFFVEK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatagcaattcggcgcggggcgcgatcgtcttcgagaccggcgtcgaatttgcc
gcgtggtcgcatcatgccgcacagatcgaactctgcctcttcgaggatgacggcaacagg
gaattcgcgcgcctgccgatggcgcgcgatggcaaccacattcatcgtctctttgtcgac
ggcctcaggcaaggcgcccgctacggctatcgcgccgacggcatctatgcgcccgacaac
ggcctctggttcgatccctccaaactgctgaccgatccttacgcgaaagagatcgaccgg
ccgttccgttacgatccacgcctcggcatctatggcgaggacagccaggatctgatgccg
aaggcgatcgtcaccaccgataccccagctgcaatcgaaaagccgctcttcaaaccgggc
ggctttatctatgaggtggcggttcgtcctttcaccatccttcacccggatgtgccggag
gctcagcgtggcaccgtcgcagcccttgcccatccctccgtcatcgcgcatctgaagcgg
atcggcgtcgatgctgtcgagctgatgccgatcactgcctggatcgacgaacgccacctg
ccgccgctcggcctcaccaatggctggggctataatcccgtcggcctgatggcgctcgat
ccacggcttgttcccggcggcatggcggaactgcgcgagacggtcgcggctctccacgcc
gaaggcatcgcggtcattctcgacctcgtcttcaaccataccggcgagagcgatcgctat
ggcgcgacactgtcgctgcgcggcctcgacaacctgcattattaccgtcacgctcagaac
agccccggtgaactcgtcaacgacacgggcaccggcaatacgatcgcctgtgatcacccc
gaggtcaggcgtctcgttatcgacagcctgcgtcatttcgtgctcaacgccggcgtcgac
ggttttcgtttcgatctcgccccggtcctcggccgcaccgccacgggcttcgagcccaat
ggtacacttgcggcgatcctggccgacgatgtgcttgccgaccgcgtcatgattgccgaa
ccctgggatatcggccccggcggctaccagctcggcaatttcccgcgacccttcctggaa
tggaacgaccgggttcgtgacgacctgcgctgctactggcgcggcgatcaatggaagacg
ggttcgctcgccacggcgcttgccggctcctccgacatcttctcccgcaatgacggcaag
gatacccgcagcgtcaatttcctcgccgctcacgacggcttcacgctgatcgaccttgtc
tcctatgccggcaagcacaacgatgccaatggcgagcacaatcgcgacggccacaacgag
aaccattcctggaacaacggcgtcgagggcgaaacccactatcccagcatccgcaagcgc
cggatcaacgacgtcatggcgctgatttcgacgctctttgccactcggggcagcatcatg
ctgacggccggcgacgagggcggccgcagccagcgcggtaacaacaatgcctattgtcag
gataacgagatcacctggctggactggaagacgctgaacgaagatcttgtcgcccacacc
gccttcgtgtcagggctgcgccgccgcttcaccgccttttgggaaaccggcttcctctcc
ggcgatggcgatgtcgaatggatttcgctctctggcgaagcgatgaccgtcgctgaatgg
gagacgccgtcgctctcgaccctcggcatgctgcttgcgaccagcgaccgctcctctcga
ggcgagcagacccggcttgccgtgctcttcaaccggtcggacagccgccagatattcacg
cttccctcgaaaggcgaggcctggcggcaactgacgccggaggggacaaaaaaagccggt
gccgacgttaccgtcgagccacgctccgtcgcctttttcgtggaaaaatga
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