Rhizobium sp. Pop5: NE852_19105
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Entry
NE852_19105 CDS
T11439
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00330
Arginine and proline metabolism
rhip00480
Glutathione metabolism
rhip01100
Metabolic pathways
rhip01110
Biosynthesis of secondary metabolites
rhip04148
Efferocytosis
Module
rhip_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NE852_19105 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NE852_19105 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NE852_19105 (odc2)
Enzymes [BR:
rhip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
NE852_19105 (odc2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UVD56167
LinkDB
All DBs
Position
complement(3450245..3451378)
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AA seq
377 aa
AA seq
DB search
MTTQRIRDFLATRRPDGPCLVVDLDVVRDNFHAFRHAMPDSAIYYAVKANPAPEVLKLLA
NLGSNFDCASVAEIEMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQSYGVSFHVGSQ
MTKVDAWDSALADAKRVFVQLAKQGIYLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALR
KHFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDE
AIRYPIRTDRDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcgcatccgcgactttctcgcaacccgacgtcccgacggtccctgcctc
gtggttgacctcgacgtcgttcgcgacaatttccacgccttccgtcacgccatgccggac
agcgccatctactacgccgtcaaggcaaacccggctccggaagtgctgaagctgctcgca
aacctcggctccaatttcgattgcgcatccgttgccgaaatcgaaatggcgctcgaagcc
ggtgcgaccgccgcccgcatctccttcggcaacacgatcaagaaggaacgcgacgttgcc
cgcgctcatgcgctcggcgtcagcctctttgcggtcgacagccacgaggaagtcgagaag
atctcgcgcgccgctcccggcgcccgtgtcttctgccgtgtcctgacggatggcgaaggc
gccgaatggccgctgtcgcgcaagttcggctgcgttccgcagatggccgtcgacgttctc
gtctacgctcatcagctcggcctgcagtcctacggcgtctcgttccatgtcggctcgcag
atgaccaaagtcgatgcctgggattcggctcttgccgatgccaagcgcgtcttcgtccag
cttgccaagcagggcatctacctgcagatggtcaacatgggcggcggcttcccgaccaag
tacctgcgcgacgttccgtccgccgaggcttacggcaagtcaatctaccaggcgctgcgc
aagcatttcggcaaccagatcccgcagacgatcatcgagccgggtcgcggcatggtcggc
aacgcaggcgttatcaaggctgaagtcgtcctgatctccaagaagtcggacaatgacgat
gcgcgctgggtcttcctcgacatcggcaagttcggcggtctcgccgaaacgatggacgaa
gccatccgctacccgattcgcacggatcgcgacggcgacgagatggagccctgcgtcatc
gccggcccgacctgcgattcggccgacgtgctctacgagaagaacctctatccgctgccg
atctccctttcgatcggcgacgaggtcctgatcgaaggcaccggcgcctacacgacgacc
tattcggcggtcgctttcaacggtttcgaaccgctgaaggcctacgtcatctaa
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