Rhizobium sp. Pop5: NE852_20355
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Entry
NE852_20355 CDS
T11439
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NE852_20355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhip03400
]
NE852_20355
Enzymes [BR:
rhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NE852_20355
DNA repair and recombination proteins [BR:
rhip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NE852_20355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_22
nSTAND_NTPase5
Zn_ribbon_Com
Motif
Other DBs
NCBI-ProteinID:
UVD56392
LinkDB
All DBs
Position
complement(3710877..3713093)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTDSSDLFGALFEAPPANRTVPVLVPMPAPKPYSYSVPDGMAVEPGSVVQVPLGPRQVI
GVVWDGGEDGVDPKKLRPISHVFDCPPLSREMRDFIDWVATYTLSPPGLVARMALRAPNA
FEPEPMVEGLKLVGGEPERMTPARARVLDTASDGFSWTRSGLAHAAGVSTSVVDGLITLG
IFETVFLPPPPVVAMPDPDFAAARLEGPQKEAAEEIVSEIRRQEFSVSLIDGVTGSGKTE
VYFEAIAETLKRGKQVLILLPEIALTASFLERFQDRFGAKPAEWHSDLASRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFPV
ILVSATPSVESQVNGQSGRYSTVHLPTRFGDAALPDLHLIDMRRHAPERGGFLSPVLIRA
IGKTVERREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDIMGGVKRLRLELEAIA
KGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSGAFYEREITERERAALPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQVSGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRAMLSQSP
KERGSVQVQLDIDPQSFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagattcgtccgatctctttggcgcgcttttcgaggcaccgcccgcgaaccga
acggttccggtgctggtgccaatgccggcgccgaaaccctattcctattcggtgcctgat
ggcatggcggtcgagcccggctcggtcgtgcaggtgccgctcgggccgcggcaggtgatc
ggcgtcgtctgggacggcggcgaggatggcgtcgatccgaagaagctccggccgatcagc
catgtcttcgactgtccgccgctctccagggaaatgcgggatttcatcgactgggtagcg
acctacacgctctccccgcccggcctcgtcgcccgcatggcgctacgggcgcctaacgcc
ttcgagccggaaccgatggtggaggggctgaagctcgtgggcggcgagccggagcggatg
acgccggcgcgtgcccgggtgctagatacggcgtctgacggtttttcgtggacgcgcagt
ggtctggcgcacgcggcgggtgtgtcgacgagtgtcgtcgacgggctgatcacactcggc
atcttcgagacggtgttcctgccgccaccgcctgtcgtcgcgatgccggatccggatttt
gccgccgcgcgtctcgaagggcctcagaaagaggcggcggaggagatcgtctctgagatc
cgcaggcaagaattctcggtgtccttgatcgacggagtgacgggctctggcaagacggag
gtttatttcgaggcgatcgccgaaacgctgaaacgcggcaagcaggtgctgatcctgctg
ccggagatcgcgcttacggcaagtttcctggagcgtttccaggatcgcttcggggcgaag
cctgccgaatggcactccgatctcgcctcgcgcatgcgtgaaaaggtgtggcgccaggcg
gtgaccggcgaagtcagggtcgtggccggcgcccgctcggcactgttcctgcctttcgag
gaccttggcctcatcatcgtcgacgaggagcacgatcccgcctacaagcaggaggatcgc
gtcttctacaatgcccgcgacatggctgtggtgcgcggccgcatcggcgattttcctgtc
attctggtgtcggcgacaccatcggtcgaaagccaggtcaacgggcagagcgggcgctac
agtacggtgcatctgccgacacgattcggcgacgccgcgttgccggacctgcatctcatc
gatatgcgcaggcacgcgccggagcggggcggcttcctgtcgccggtgctgatccgggcg
atcggcaagacggtggaaaggcgcgagcaggcgctgctcttcctcaatcggcgcggttat
gcgccgttgacgctctgccgtgtgtgcggccatcgcttccaatgcccgcaatgttcgagc
tggctggtggagcatcgcttccgcaagcagctgcaatgccaccaatgcggccatgccgag
cgcacgccggaggcctgcccggaatgcggcacgctcgaccatctcgttgcctgcgggccg
ggtgtcgaacgcatcgccgaagaggtggagcggcatttccccgaggcgcggacgatcgtt
ctctcctcagatatcatgggcggggtgaagcggctgcggctggaactggaagcgatcgcc
aagggcgaggccgatatcgtcatcggcacgcagctcgtcgccaaggggcacaattttccg
ctgatgacgctggtcggcatcgtcgatgccgatctcggcctcgccaacggcgatccgcgc
gcggccgagcgcaccttccagcttctgtcgcaggtgacggggcgcgccggacgcaccggc
ctcaagagccatgggctgctgcagacctaccagccgcagcatccggtcatgcaggcgatt
gtatcaggcgattctggcgccttctacgagcgcgagatcaccgagcgcgagcgcgccgcc
ctgccgcccttcggcaggctcgcctcgatcatcgtttccgccgagacccgccacgatgcc
gaaaaccatgcacgcggcatgcgcaacgcggcaccgcaggtctccggtatctcagtgctc
ggcccggcggaagcgccgcttgcgctggtgcgcggccgccaccgcttccgtcttctggtg
catggacggcggaattcggacatgcaggggttcctgcgggcgatgctgtcgcaatcgccg
aaagagcgcggatcggtgcaggtgcagctcgacatcgatccgcagagttttctgtag
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