Rhizobium sp. Pop5: NE852_20740
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Entry
NE852_20740 CDS
T11439
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00300
Lysine biosynthesis
rhip00470
D-Amino acid metabolism
rhip01100
Metabolic pathways
rhip01110
Biosynthesis of secondary metabolites
rhip01120
Microbial metabolism in diverse environments
rhip01230
Biosynthesis of amino acids
Module
rhip_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NE852_20740 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NE852_20740 (dapF)
Enzymes [BR:
rhip01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NE852_20740 (dapF)
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NCBI-ProteinID:
UVD56466
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Position
complement(3786085..3786990)
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AA seq
301 aa
AA seq
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MSATVEFARMNGLGNKILVVDMRGRPDKVTPAAAIALNADPHTEFDQIMAIHDPKAEGTD
AFIDILNSDGSKAQACGNGTRCVVQALAAETGKKAFTFQTVAGILNAVEHEDGTISVDMG
RPVFDWNKIPLAEEFHDTSRIELQIGPIDDPVLHSPSAMSMGNPHAIFWVDKDVMSYDLA
RFGPLLENHPMFPERANITLAQVTSPTSVTTRTWERGAGLTLACGSAACSAAVSAARTGR
TGRKVSINVASARPPATLSIEWRERDDHVIMTGPAEWEWSGRVDPSTGLWSRDDSREAGA
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacggtcgaattcgcaaggatgaacgggcttggcaacaagatcctggtcgtc
gacatgcgcgggcggccggacaaggtgacgcctgcggcggcgatcgcgctcaatgccgat
ccccataccgagttcgaccagatcatggctatccatgatccgaaggccgaaggcaccgat
gccttcattgatatcctgaattccgacggctcgaaggcgcaggcctgtggaaacggcacg
cgctgcgtcgtgcaggcgcttgcggccgaaaccggcaagaaggccttcacctttcagacg
gtcgccggcatcctcaacgccgtcgagcacgaggacgggacgatttccgtcgatatgggc
cgcccggtcttcgattggaacaagatcccgctggcggaagaattccacgatacgagccgc
atcgaattgcagatcggcccgatcgacgatccggtgctgcattcgccttccgccatgtcg
atgggcaatccgcatgcgatcttctgggtggacaaggacgtgatgtcctatgatctcgcc
cgtttcgggccgctgctggaaaaccatccgatgtttcccgagcgcgccaatatcacactg
gcgcaggtgacatcgccgacttcagtgacgacgcgcacctgggagcgcggcgccgggttg
acgctcgcttgcggttcggccgcctgctctgccgccgtcagcgcggcgcgcaccgggcgc
accggccgcaaggtgtcgatcaacgttgcaagcgccaggccgccggcgacgctttccatc
gagtggcgcgagcgtgacgatcacgtcatcatgaccggcccagccgaatgggagtggtcc
ggccgggtcgatccttcgactggtctctggtcgcgcgacgatagccgggaggccggggcg
cagtga
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