Rhizobium sp. Pop5: NE852_22485
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Entry
NE852_22485 CDS
T11439
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03030
DNA replication
rhip03410
Base excision repair
rhip03420
Nucleotide excision repair
rhip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NE852_22485 (polA)
03410 Base excision repair
NE852_22485 (polA)
03420 Nucleotide excision repair
NE852_22485 (polA)
03440 Homologous recombination
NE852_22485 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhip03032
]
NE852_22485 (polA)
03400 DNA repair and recombination proteins [BR:
rhip03400
]
NE852_22485 (polA)
Enzymes [BR:
rhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NE852_22485 (polA)
DNA replication proteins [BR:
rhip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NE852_22485 (polA)
DNA repair and recombination proteins [BR:
rhip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NE852_22485 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NE852_22485 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVD56792
LinkDB
All DBs
Position
4169854..4172853
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARKAEAIGADVTVVSSDKDLMQLVTSNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
DMAKLSRELVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKAMEFTTLTRRVAEVCDCDAS
AIEPAVIRIEWGEAAHGPDLDAAQPEPVAGGIPDVSGDAVPVPPRAKPKAAVEGAFSPVD
LAKARAEAFVNLPFDHSAYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGF
SMAIADNVADPTGTKIRAAYVPLAHKNGVGDLLGGGLAENQIPMRDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGVETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLSHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMESRGITVDRQILSRLSGELAQGAAGLEDEIYRLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPETRRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTQGHKLISADYSQIELRVLA
HVAEIPQLTRAFEEGVDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEAGLAERVRMLLQVHDELIFEVEDEDV
EKAMPIIVSVMENATMPALEMRVPLKVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttcgggattcatcttccgggcattt
catgcgctgccgccgctgacgcgcaagactgacggcctgccggtcggcgccgtctccggt
ttctgcaacatgctgtggaagctgttgagggatgcgcgcaacaccgatgtcggcgtcacg
ccgacgcatctcgccgtcattttcgactattccgccaagacctttcgcaaggatctctac
gacgcctacaaggcgaaccgctcggccccgcccgaagagctcgttccgcagttcggcctt
atcagagaggcgacccgcgccttcaatctgccctgcatcgagaccgaaggcttcgaagcc
gacgacatcatcgcgacgtatgctcgtaaggccgaggcgattggcgccgacgtcaccgtc
gtctcctccgacaaggatctgatgcagctcgtcacctccaatgtccacatgtacgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattccgtcgacaacgttcccggcattccc
ggcatcggcccgaaaaccgctgctcaacttcttgaggaatatggggacctcgacacgctg
ctcgagcgtgccaccgagatcaagcaggtcaagcgccgcgagacgatccttgccaatatc
gacatggcaaagctttcgcgcgagctcgtgcggctgcgcaccgatgtgccgctcgacctc
gatctcgatgcgctggtgctggagccgcagaacgggccgaaactgatcggcttcctcaag
gcgatggaattcacaacgctgacgcgccgtgtcgccgaagtctgcgattgcgacgcgagc
gccatcgagccggcagtcatccgcatcgaatggggcgaggccgcccacggccccgatctc
gatgcggcgcagccggagccggtcgccggcggcattcccgacgtttcgggcgatgccgtg
cccgtgccgccgcgcgcgaagccgaaggcagccgtcgaaggcgccttttcgcctgttgat
cttgccaaggcgcgggccgaggccttcgtgaacttgcccttcgatcattcggcctatgtc
acgatccgtgacctcgccacactcgaccgctggattgctgatgcccgcgataccggcctc
gttgccttcgataccgagacgacctcgctcgatgcgatgcaggccgagcttgtcggcttc
tcgatggcgatcgccgacaacgtggccgatcccacgggcacgaagatccgcgccgcctat
gtgccgctggcccacaagaacggtgtcggcgatctgctcggcggcggccttgccgaaaac
cagatcccgatgcgcgatgctcttccgcggctcaaagcgctgctggaggacgaatcggtt
ctgaaggtcgcgcagaacctgaaatatgattatctcctgatgaagcgctatggcgtcgag
accagaagtttcgacgacacgatgctgatttcctacgtgctcgacgccggcaccggcgcg
cacggaatggacccgctctcggaaaaattcctcagccatacgcccatcccctataaggac
gtggccggcagcggcaaagcaaacgttacctttgatctggtcgatatcgatcgcgccacc
cattatgcggccgaggatgcagacgttacgctacgcctctggctggtgctgaagccccgg
ctcgctgcggcagggttgaccagtgtctacgaacgtctggagcggccgctgctgccggtg
ctggcgcgcatggaatcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctctcc
ggcgaactggctcagggtgccgctggcctggaagacgaaatctaccggctggccggcgag
cgcttcaatatcggctcaccgaagcagctcggcgatatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaagaccggacaatggtcgacctccgcgcaggtgctcgaggat
ctcgccgcggccggcttcgagctgccgcgcaagatcgtcgactggcgccagctcaccaag
ctgaaatccacctataccgacgcgcttcccggctatgtccacccggagaccaggcgcgtc
cacacctcctattcactggcatcgacgacgacgggacgcctgtcctcctccgagccgaac
ctgcagaatattcccgtgcgcaccgccgaaggccgcaagatccgcacggccttcatctcg
acacagggccacaagctgatctcggccgactacagccagatcgagctgcgggtgcttgcc
catgtcgccgagatcccgcagctcaccagagccttcgaggaaggcgtcgacattcatgcg
atgaccgcctcggaaatgttcggcgtgcctgttgaaggcatgccgagtgaagtgcgccgc
cgcgccaaggcgatcaatttcggtatcatctacggcatctcggccttcggccttgccaat
cagctttcgatcgagcgctcggaggcgggcgactacatcaagaaatatttcgagcgtttc
cccggcatccgcgactatatggaaagccgcaaggcgatggcgcgcgacaagggttatgtc
gagacgatcttcggtaggcgaatcaactatccggaaatccgttcttccaacccgtcggtg
cgcgccttcaacgaacgcgccgcgatcaacgcgccgattcagggctcggctgccgacgtc
atccgccgggcgatgatcaagatggagccggcgctcgctgaagcgggtcttgccgagcgc
gtccgcatgctgctgcaggtgcatgacgaactcatcttcgaggtcgaggacgaggatgtc
gaaaaggcgatgcccatcatcgtctcggtcatggaaaacgccaccatgccggcgctcgaa
atgcgcgtcccgctcaaggtcgacgcgcgcgccgccaccaattgggacgaggcgcactag
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