Rhizobium sp. Pop5: NE852_24170
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Entry
NE852_24170 CDS
T11439
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip00362
Benzoate degradation
rhip01100
Metabolic pathways
rhip01120
Microbial metabolism in diverse environments
rhip01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NE852_24170 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
NE852_24170 (pcaH)
Enzymes [BR:
rhip01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
NE852_24170 (pcaH)
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Motif
Other DBs
NCBI-ProteinID:
UVD59481
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All DBs
Position
pRsp_Pop5_4:complement(80069..80818)
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AA seq
249 aa
AA seq
DB search
MSEQPNRKPETGAFFARDRAWHAPALTPGYKTSVLRSPQRALLSLDGTISEITGPVFGHS
TIGELDNDLILNYARPGESAIGERIIVHGRVLDERAKPVAGALVEFWQANAGGRYRHKKE
TYLAAIDPNFGGCGRAITDEEGRYHFRTIRPGAYPWPNGVNDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDKAAIEQLIAPLDWGNTIPMDSRAYKFDIVLRGRRST
MFENRLEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaaccgaaccgcaagcccgaaaccggcgctttcttcgccagggaccgcgcc
tggcatgcgccggcgctcaccccgggctacaagacctccgtgctgcgctcgccgcagcgc
gcattgctttcgctcgatggcacgatctccgaaatcaccgggcctgtctttggccattcg
accatcggcgaactcgataacgatctgatcctgaattatgcgcgccctggcgaaagcgcc
atcggcgagcggatcatcgttcatggccgcgtgcttgacgaacgggccaagcccgtcgcc
ggcgctctggtcgaattctggcaagccaacgcaggcggccgctaccgccacaagaaggaa
acctatctcgcggcgatcgacccgaatttcggcggctgcggccgcgccatcaccgacgag
gaaggccgttaccatttccgcaccattcgccccggggcctatccctggccgaacggcgtc
aacgactggcgccccgcccatatccacttctcgatcttcggtcacggctttgcccagcgc
ctgatcacccagatgtatttcgaaggcgacccgatgatctggaaatgtccgatcgtcggt
acgattcctgataaagcagcgatcgaacaactgatcgcgccgctcgactggggcaacacc
attccgatggattcgcgcgcctataagttcgatatcgtgttgcgcggccgccgctcgacg
atgttcgaaaacagactggagggcaactga
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