Rhizobium sp. Pop5: NE852_25785
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Entry
NE852_25785 CDS
T11439
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE852_25785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_25785
Transporters [BR:
rhip02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NE852_25785
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
TOBE_3
AAA_22
T2SSE
KIP1
TOBE
Rad17
Motif
Other DBs
NCBI-ProteinID:
UVD59852
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All DBs
Position
pRsp_Pop5_2:20373..21452
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AA seq
359 aa
AA seq
DB search
MNEPFLQIRGIRKEYGPVVAVHDVTLDVRRGEFLTFLGPSGSGKSTTLYILAGFDNPTKG
DITLEGKTLLATPSHKRNIGMVFQRYTLFPHLTVGENIAFPLKVRRKSKAEIDDKVKEML
RLVRLEGFEDRKPAQMSGGQQQRVALARALAYDPPVLLMDEPLSALDKKLREEIQHEIRR
IHQQTEVTILYVTHDQEEALRLSDRIAVFSKGVIDQIGTGPELYANPKTRFVAEFIGDSD
FISCDLLSSADGQATISFGGGTVFNHIPVHGKGISGKRVALMLRPERIRLSRAQAAGAGL
AATVSDITFLGNNIHVSTETANGEALAVRLPFGHEAITGLSRGDRVHLEFDPGAAHVFC
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccattccttcagatccgcggcatacgcaaggaatacggccccgtcgtcgcc
gtgcacgatgtcacgctcgacgttcggcgcggggagttcctgacctttctcggaccatcg
ggatccggcaagagcacgacgctctacatcctggccgggtttgacaatccgacgaaaggc
gacattacgctggagggcaagaccctgctcgccacaccgtcgcacaagcgcaacatcggc
atggtgttccagcgctacaccctgtttccgcatctgacggtgggtgaaaacatcgccttt
ccgctgaaggtgaggcgcaagtccaaggctgagatcgacgacaaggtgaaggagatgctg
cgcctcgtccggctcgaaggcttcgaggatcgcaagccggcgcagatgtccggcggccag
cagcagcgtgtcgcactcgccagagcccttgcctatgatccgccagtgcttctgatggac
gagccgctgtcggcgctcgacaagaagctgcgcgaggaaatccagcatgagatccgccgc
atccaccagcagaccgaggtgacgatcctctacgtcacgcatgatcaggaagaggccctg
cggctctccgaccgcatcgccgtcttttccaagggtgtcatcgaccagatcgggaccggc
ccggaactctacgccaatcccaagacccgcttcgtcgccgaattcatcggcgacagcgac
ttcatttcctgcgacctgctgtcttctgccgatgggcaggccaccatttcgtttggtggc
ggcactgtcttcaaccatattccggtccatggaaaaggaatatcgggcaagcgggtagcc
ctgatgctgaggccggagcgcattcggctgtcgcgcgcccaggcggcgggagcgggcctt
gccgccacggtcagcgacatcaccttcctcggcaacaacatccatgtctcgactgaaacg
gcgaatggcgaggcgctggcggttcgcctgccgttcggtcatgaggcgatcaccggcctc
agccgtggcgacagggtgcatctcgagttcgatcccggtgccgctcacgtgttctgctga
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