Rhizobium sp. Pop5: NE852_26110
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Entry
NE852_26110 CDS
T11439
Name
(GenBank) hemagglutinin repeat-containing protein
Organism
rhip Rhizobium sp. Pop5
SSDB
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVD59911
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Position
pRsp_Pop5_2:92625..102026
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AA seq
3133 aa
AA seq
DB search
MSKRLGKSTTTLHGVAEADRRSFRRFTHFAQQSLAIVLSGLLVFQPMLANAQSVSASTTA
PAANQPGVGTAPNGVPLIDIVTPNSQGLSHNKYDNFDVGTSGLILNNFKGEIGTSNLGGV
TPGNPNLNTTGPASVILNEVTSGNRSALNGPTEVFGGRADVIIANPNGITCDGCGFINTP
HATLTAGVPDIGADGGLKGFTVNGGDVTFGSKGANLAAGAGSVDLFDIVSRAVTIDGPIY
GNDIRVTAGRNKFDYATGNATALSATSGTPEYAIDGSALGAMQAGRIKIVVTEKGAGVRM
RGDLAANTNELSLSADGKISLGNVSGQQGVSISSKAKVTASKLTSKAKVAVLADQGITLD
TVAADGDILLSSGSGLLSVGGEVNSAVNVLMSSAAGITAGSVVAGNALTLSSTSGDIRVA
SAVKSTEALVITATSGGISAASLVSSNNVTLSAGADIGISGDVLAERNVTASGHSISAGT
VVSGLDIAATNAANGSTVLTSAGDIRLTAGSGAVNVDGLLSAGDTSVTAAALTAQSVIAH
GALMVNAATDVSGQILSAGNIDIAGSAITSGAVIAGVDFAGTEAAGGNIVLTQSGDLTLA
SSGDIDAGTLLAAGDISASAANIRADAVTGHGAITFSGNTQVTGQFLGAGDVSISGGSIS
AGTVVAGTDFAATAASPSGAIAVGAAGDLKLDAGANGTVDIDTLLAAGALLVDAHDFQAN
NASSHGTVAISGKTSITGQLLGAGDVSVTGAAIQAGAIVSGVDFAATAQSANGDIVLGQS
GDLTLTATGGDIDAGNLLAAGDINAGATGNVSANVVTHQDMTITAGGAIDLAGQSLAAGD
ASLSAKAITVDTLVSGLDFAATAQSPNGTLTLQQTGGMSLAATSGSITAGTALLSSGALS
ANASQNVAYAKLQSLSSAALTASGGQISFGNPTRTAGNLTLTTSNIDLSNGRASNLAAGG
TLTLNAASANLANSSLTLGGLALNLSGTADLSGARVNAVTNSGGSGDITINASGLSTTAG
TALLAAHDLTLTLPSLINAGQLAAGHDLTFNISGNFTNSATGLAYAGNDASLFVGGTLTN
DQGAIISGNDLTIAGATSGQRNAALTNISGLIQAGNDMSILTSNLTNKRSATPQWTTGTL
VSSGVVSGFTLNPVAAGMPFGYLETEDQNMFQLYAGVDAPLWQDYEPLLWSKATLSDGTT
YHAWTWISGNGPTKVQPIFDWIMDRVPKDANGNPVLDPNNPSRYFIVDEVNHGGSDTSTT
YTWDWSSHLSQSVYEDRLIGALSPEATIRAGRNLTVDATALANSYSSIEAGGDATLKGST
LTNTGVTLFRTTTTTCSAQGACTAYNANGTANPSKNIANGTTIVSSVQAIGGVSANIKAG
GALSVDFGSVNNTSAAGSMAGGASLAAAGNPGDPLSALSGLTAGGALFNVNASLGSVAAN
GGSLLSGLSNIADRIRVDGAALAKAAKPQSGGFGGTISGQIFLFETRADFLDVRKFYGSS
YFMSRIGYVPETTVPFLGDAYFENQLIDTQLRQLVGEGLGRSTFIAGNDAIEQMKTLLDN
GANYAKDHGLAIGQGLTPEQAAALTKSIVLYQWQTIDGVQALAPVVYVAAADQQKLTGAG
AVMAGGSIDMNVGNLDNSGLIASAGGLKVSGSSIQGSGTFLSRGDTVVNATNGITLAAQT
MTIGGQNMVNTNAGVTASGNVQLAGGSGDLALKGVKVNAGGSAQLTGNNVTLAAAKVDNS
SQQNATGTQVASGGALTIKATDNVNVIGSSAKAGTTLDVTADKGSVAVVATDVARNNQSG
YTRTLSTDQQQSQLSAGTDTTIKSGDDILLSGSSVKAGGNVTLSAGDDINITAAQEQSAS
TFGKKFASSITHVGSEISAGGDLSVTAGNGSGDHDLNIVGSKLAADGKVGLKASDDVTIA
EATDTATLDTKLSVKGGFLGKSEKTTTHLETTTAVGSAITGGGGVEITSGKDTVISASKI
EAGKEDATTPADLNITAGGNLVIASGKDTTAKDDKGSRSGFLSKGSSSHKSYDETTVASE
LGASGNINLDAGKGAVIAGSKVDADGSINVAADSVSIIGAQEAHELEEQRKKSGIGVGSG
GGFISIYGTQQDTGKQASTLNVGSALSASEDVTLTARKTDLNIMGSSVDAERDIYLSASR
DVNVTPGSKSFSQSEQEKKSGFGLSFSAGNGGFAIGIGAQTSKDGSAQQSDTNAASILSA
GRDLHISAGNNVNLQAAQASAERDVNLFATNDINLLSANDVTNYQEVHEKTFAGVTLSVS
SQLGSAAQSIMNGAERLSDPGGVNGLTNSAIAGLSFYEGIKGLRGVYDGLTSTDPEIGTG
LSFNIGINAGVSHQQSASSSETSTPVVTDIRAGRSIALAAQNGSITSDGAQIAAGYDKFG
LRTISADPLAGDIILSAGSGNINLNAATGTSESSTSNSSWSAGVGVNLGCTTRTGCSTSV
GASGSYGKGGSDTVSTSHTNTHVNGTGDVTILTNDLALRGATVTGNSVTADVRNLTVESL
VDTTNAHADQLSLSGQIGFGSTGISGVTQKAKGDVALVSQQSGIHAGTGGLDLNIEKQTT
LVGGLITSQATSDHNTFNTGTLTVTDIDTHSSWKAETYGGSIGVGGLSPAPPVKAGEKET
GKAYSAIGANIGITITDPAHQTQDIGTIRRDTQNTNTSLPGLPDLEDILRDQYKTQADLQ
QAQKTMAGLVGDVASEFYEQAARNQDQAGMDYWKEGGAGRVLLHTIGSGILGGVNGWEGA
LKGAAGAATASLLAPAIGKLVDGMLKGTSVEGTEDGKWLAALIGEGLSALVAGAVGGGEG
ASYGAAQYQYNYLKHAEREEFTRVQASCENTKDATDCARADELREISYGRDRKIEACVGS
SSSDCVTARVDLRIAAAEYLDAALTGDGDDLDGLSLLERHMVFLDTWKYAVDGDPTDSQQ
LTDAASTLTSAAAKALLTGSKDEIAKIIRDPIIIGAIAFGGVGNARGIVGEGTGVGRGSN
GTLIDEITGSMPPVKPLVNPATNLASEARANHILYGDGPGSGGHLWPGQPGKTAFPASWN
ADKVMSTISDIATDPALSWKPQTGNGGLYTKSGKPARFIVTDAGGNLPVIDGVPIRVVIE
PAGEGIITGFPQY
NT seq
9402 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaggctgggcaagtcgacgacgacacttcatggcgtcgctgaggccgataga
cgatcctttcgcaggttcacgcatttcgcccagcaatcgcttgccatcgtgctcagcggg
ctgctggtctttcagccgatgctggccaatgcccagtcggtttcggcaagcacgacggcg
ccggccgccaatcagccgggcgtcggcacggcgccgaacggcgtgccgctcatcgacatc
gtcaccccgaacagccagggtctgtcgcacaacaaatacgacaatttcgacgtcggcacc
tcaggcctcatcctcaacaacttcaagggcgagatcggcacctccaatctcggcggcgtc
acgccgggcaatcccaatctcaacacgacagggccggcatccgtcattctcaacgaggtc
accagcggcaatcgctcggcgttgaacgggccaaccgaggtgttcggcgggcgggccgat
gtcatcatcgccaatccgaacggcatcacctgcgacggctgcggcttcatcaacacgccg
catgcgacactgacggcgggtgttcccgatatcggtgccgatggcgggctgaagggtttc
accgtcaatggtggcgatgtcaccttcggctccaagggcgccaaccttgccgccggtgcc
ggcagcgtcgatcttttcgacatcgtctcccgtgcggtcacgatcgacggtcccatttac
ggcaacgatattcgcgtgaccgccgggcgcaacaaattcgattacgcgaccggcaatgcg
acggcgctgtcggcgacgtcgggaacgccggaatacgccattgatggttcggccctcggc
gccatgcaggcggggcgcatcaagattgttgtcaccgagaagggcgccggcgtgcgcatg
cgcggcgatctggcggccaacaccaacgaactctccctgtcggccgacggcaagatctcg
ctcggcaatgtctccggccagcagggcgtctcgatctcctcgaaggcgaaggtgacggcg
tccaagctcacgtcgaaggcaaaggtcgccgttctggcagatcagggcatcaccctcgat
acggtcgccgccgatggcgacattctgctttcgagcggcagcggcctgctaagcgtcggc
ggcgaggtcaacagcgccgtcaacgtgctgatgtcgtcggcggccggaatcaccgccggc
agcgtcgtggccggcaatgcgctcactttgtccagcacatcaggcgacattcgggttgca
agtgcggtcaagagcaccgaagcgcttgttatcaccgcgacatcgggcgggatttcggcc
gcctcgctcgtcagcagcaataacgtcacgctttccgccggcgccgatatcggcatttcg
ggcgatgtgctggcggagcgcaacgtcacggcttcaggtcactcgatttcggcgggaacc
gtcgtctccggcctcgatatcgccgcgacgaatgcggcaaacggcagcacggttctcaca
agcgccggcgacatacggcttaccgccggcagcggcgccgtcaatgtcgacgggcttctg
tcggccggcgatacgtcggtcaccgcagcggcgctgacagcccagagcgtcattgcgcat
ggcgcccttatggtcaacgcggccaccgacgtcagcggccagatcctcagtgccggcaac
atcgacatcgccggctcggccatcacatctggagcggtcatcgccggcgtcgactttgcg
ggaacggaagcggccggcggcaatatcgtcctgacgcagagcggtgatctcacccttgcc
tccagcggcgatatcgatgccggcaccctgcttgcggcaggcgatatctcggcttctgcc
gccaatatccgcgccgatgccgtcaccggccatggcgcgatcacgttttccggcaacact
caagtgacgggccagttcctcggcgccggcgatgtgtcgatctccggcggctcgatttcg
gcgggcaccgtcgtcgccggcaccgactttgccgccaccgccgcatcgcccagcggcgct
atcgccgtcggcgcggccggcgaccttaagctcgatgccggcgccaacggcaccgtcgat
atcgacacgctgcttgccgccggcgcgctcctcgtcgatgcccatgatttccaggctaac
aatgccagcagccacggaaccgttgcgatcagcggcaagacgtcgatcaccggtcagctg
cttggcgcaggcgacgtctcggtcacgggagcggccattcaggccggcgccatcgtctcc
ggcgtcgatttcgccgccaccgcccaatcggccaatggcgacatcgtcctcgggcaaagc
ggcgacctcacgctcacggcgaccggcggcgacattgatgccggcaatctcctcgctgcc
ggcgacatcaacgccggtgcgactggcaatgtcagcgccaacgtcgtcacccatcaggac
atgacgatcaccgcgggcggcgcgatcgatcttgccggccaatcgctcgcagcgggcgac
gccagcctctcggcaaaggcgatcaccgtcgatacgctcgtctccggtctcgacttcgca
gccaccgcccaatcccccaatggcacgttgacgctgcaacagacgggcggcatgagcctt
gccgccacgagcggctctatcaccgccggcaccgcgctgcttagcagcggtgctctttcg
gccaacgcaagccagaatgtcgcctatgccaagctccagagcctcagcagcgcggcgctc
acggcctcgggcggccagatcagcttcggcaatcccacccgcaccgccggcaatctgacg
ctcaccaccagcaatatcgatctctccaatggccgggcgagcaaccttgccgccggcggc
acgctgacgctgaatgccgccagcgccaatctcgccaatagcagcctcactctcggcggc
ctcgccctcaatctctccggcacggccgatctcagcggcgcaagggtcaacgcagtcacc
aattcaggcggctcgggcgatatcaccatcaacgcgagcggcctctccacgacggccggc
acggcgctgctcgccgcccacgacctgacgctgacgctgccgtcgctgatcaatgcaggg
caactggcagccggccacgatctgacattcaacatttccggcaacttcaccaacagcgcc
accggtcttgcctatgccggcaacgacgccagcctcttcgtcggcggaacgctcaccaac
gatcagggcgccatcatatccggcaacgatcttacgattgcgggcgcgacatcgggacaa
aggaacgcagcccttaccaatatctccggcctgatccaggccggcaacgacatgtccatc
ctgaccagcaatctgaccaacaagcgctccgccacgccgcagtggacgaccgggacgctg
gtatcgtctggtgtcgtcagcggctttacgctcaacccagtcgccgccggcatgcctttc
ggctatctcgagaccgaagaccaaaatatgttccagctctatgcgggcgtggacgcaccg
ctgtggcaggattatgagccgctgctctggtcgaaggcgacgctctcggacggtacgacc
tatcatgcctggacctggatatcgggcaacggaccgacgaaagtccagcccattttcgat
tggatcatggaccgcgttccaaaggatgccaacggcaatcccgtcctcgatcccaacaat
ccgtcacgctatttcatcgtcgatgaggtcaaccacggcggctcggacacaagcaccacc
tatacatgggactggtcgtcccaccttagccagtcggtctatgaggaccggttgattggc
gcgctcagcccggaagccacgatccgcgcaggccgcaacctcaccgtcgacgccacggct
ctcgccaattcctacagctcgatcgaagccggcggtgacgcgacgctgaagggctcgaca
ctgaccaataccggcgtcaccctcttccgcacgacgacgacgacctgcagcgcccaaggc
gcctgcactgcctataatgccaacggcactgccaatccttcgaagaacatcgccaacggc
acgacgatcgtcagctccgtccaggcgatcggcggcgtatcggccaatatcaaggccggc
ggcgctctctccgtcgatttcggcagcgtcaacaatacgtcagcggccggctcgatggcc
ggcggcgccagcctggcggccgccggcaatcccggcgatccgctctcggcgctttccggc
ctgaccgccggcggcgcgctgttcaacgttaatgcgtcgctcggcagcgtcgccgccaat
ggcggcagcctgctttccggcctcagcaatatcgccgaccggatccgcgtcgatggcgca
gcccttgcgaaagccgccaaaccgcaatcgggcggcttcggcggcaccatatccgggcag
atattcctgttcgaaacccgcgccgattttctcgatgtcagaaaattctacggctccagc
tatttcatgagccgcatcggctacgtgccggagacgacggttccgttcctcggcgatgcc
tatttcgaaaaccagctgatcgacacgcagttgcggcagctggtcggcgaagggctcggc
agaagcaccttcatcgccggcaatgacgccatcgaacagatgaagacgctgctcgacaac
ggtgccaactatgcgaaggatcacggcctggccatcggccagggcctcacgccggagcag
gcggcagcgctcaccaagtcgatcgtcctctaccagtggcagacgatcgatggcgtgcag
gcgctcgcgcctgtcgtttatgtggccgccgccgaccagcagaagctcaccggcgccggc
gccgtcatggcgggcggctcgatcgacatgaatgtcggcaatctcgacaattccggcctg
atcgcatccgccggcggccttaaagtctccggcagctccatccagggcagcggaaccttc
ctgtcgcgcggcgacacggtggtcaacgccaccaatggtattacgctggccgcccagacc
atgacgatcggcggccagaacatggtcaacaccaatgccggtgtgacggcgtcgggcaac
gtgcagcttgccggcggcagcggcgatctggcgctgaagggcgtcaaggtgaacgccggc
ggctccgctcagctcacaggcaacaatgtcacgctcgcagcggccaaggtcgacaactca
agtcagcaaaatgcgaccggcacccaggtcgccagcggcggagccctgacgatcaaggca
accgacaacgtcaatgtcatcggcagttcagccaaggcgggcacgacgcttgacgtgacc
gccgacaagggctcggtagccgtcgttgcgaccgatgtcgcccgcaacaaccagtccggc
tacaccaggaccctctccaccgaccagcaacaatcgcagctttctgccggcacggacacg
acgatcaaatcaggcgacgacatcctgctctccggctcctccgtcaaggctgggggcaat
gtcacgctcagcgccggcgacgatatcaatatcactgccgcgcaggagcaatcggcatcc
accttcggcaagaagttcgcctcgtcgatcacccatgtcggctcggaaatatcggccggc
ggcgacctctcggtgacggcgggcaacggcagcggcgatcacgacctcaacatcgtcggc
agcaagcttgccgccgacggcaaggtcggcctcaaggcttccgacgacgtgacgatcgcc
gaagccaccgacaccgcaaccctcgacaccaagcttagcgtcaagggcggtttcctcggc
aagagcgagaagacgaccacgcatctggaaacgacgacggccgtcggttccgccatcacc
ggcggtggcggcgtcgaaatcacctcgggcaaggacacggtcatttccgcctcgaagatc
gaggccggcaaggaagacgcaaccactccggccgacctgaacatcaccgcgggcgggaac
ctcgtcatcgcctctggcaaagacactacagcgaaagatgacaaaggctcgcgcagcggt
ttcctgtccaaaggctcgtccagtcacaaaagctatgacgaaacgacggtcgcctctgaa
ctcggcgcatcgggcaacattaacttggatgccggcaagggggcggttattgccggttcc
aaagtcgatgcggatgggtcgatcaacgtagcggctgacagcgtctccatcattggagcg
caggaggcgcacgaactcgaagagcagcgcaagaagtccggcatcggtgttggctccggg
ggcgggttcatctctatctacggcacgcagcaggacaccggcaagcaggcctcgacctta
aatgttggctcggcgctttcggcaagcgaggacgttacgctcacggcccgcaagactgat
ctcaatatcatgggctcctcggttgatgccgagcgggacatctacctgtcggcatcacgc
gacgttaacgtgacgcccggttcgaagagcttttcgcagtcagagcaggagaagaagtcc
ggcttcggcctgtctttctccgctggcaatggcggctttgccattggcatcggcgcacaa
acgagcaaggatggctcggcgcagcagtccgacaccaatgcggcgtcgatattgtccgcc
ggccgcgacctccacatttcggcgggcaacaacgtcaaccttcaggccgcgcaggcttcg
gccgaacgcgacgtcaatctgtttgcgaccaatgacatcaatctgctgtcggccaacgat
gtcaccaattatcaggaggtgcacgagaaaaccttcgctggcgtgacgctcagcgtttcc
agccagttgggaagtgccgcccaaagtatcatgaacggggccgagcgcctctcggatccc
ggcggcgtcaacggtctcaccaatagcgcgattgccggactcagcttctatgagggcatt
aagggcctgaggggggtctatgacggcctgacgagcaccgatccggaaatcggaacgggc
ctttccttcaatatcggcatcaacgccggtgtcagccatcagcagagcgcgtcctcatcg
gagacatcgacgcctgtcgtcaccgacattcgcgccggccgctccatcgccctggcggca
caaaacggttcgatcaccagcgacggcgcgcagatagcggccggctacgacaagttcgga
ctaaggaccatttccgccgatccgttggcgggcgacattatcctgtcggccgggagcggc
aacatcaatctgaatgcggcgactggtacgtcggaatcgagcacttcgaacagctcctgg
agcgccggcgtcggcgtcaatctcggctgcacgacgagaactggatgcagcaccagtgtc
ggcgccagtggctcctatggcaagggcggttccgataccgttagcaccagccatacgaac
acccatgtcaacggcacgggcgacgttactatccttactaatgatctggcgttgagagga
gcgaccgttaccggtaattccgtgacggcagacgtcaggaacctgacggtcgagagccta
gtcgatacgacgaacgcccatgcagatcaactcagcctctctggccagatcggcttcggc
tcaaccgggatctccggtgtcacacaaaaggcgaagggcgatgttgcgctcgtctcccaa
caatccggcattcatgcaggcaccggcggcctcgatctcaacatcgaaaagcagacaacg
ctggtgggtgggctgatcacaagccaggcaacatccgaccacaacactttcaataccggc
acgttgacggtaacggacatcgacacccattcatcttggaaggccgagacctatggcggt
tctattggcgtcggcggcttgagcccggcgccgcccgtcaaggctggtgagaaggagacc
ggcaaggcctactcggccatcggcgccaatatcggcatcaccatcaccgatccggcgcac
cagacgcaggacatcggcacgatccggcgtgatacgcaaaacaccaacacctctctgcct
ggcctgccggacctcgaagatatcctgcgcgatcagtacaagacccaggccgatctgcag
caagcgcagaagaccatggcagggctcgtgggtgacgttgccagcgaattctacgagcaa
gctgcccggaaccaggaccaagccggaatggactactggaaggaaggtggtgccgggcgc
gtgctcctgcataccatcggctccgggattctcggtggcgtgaacggttgggagggggca
cttaagggagccgccggtgccgcgaccgcttcgctacttgcccccgcgatcgggaaactc
gttgatggcatgctgaagggcacgagtgtcgagggaaccgaggatggaaaatggctagct
gcgctgattggagagggactgtcggctctggtggctggcgccgtcggtggtggcgagggc
gcatcctatggcgcagcgcagtatcagtataattatctcaagcatgcggaacgtgaggag
ttcactcgtgtccaggcgtcctgcgagaataccaaggacgcaacagactgtgcgcgcgca
gatgagctccgcgaaatctcatatggtcgtgaccgaaagatcgaggcctgtgttggcagc
tcatcgtcggactgcgttacggcccgcgtcgatctacggattgcggctgctgaatatctc
gacgcggcgctgaccggagacggtgatgatctcgatggtttgtccctgctggagcggcac
atggtgtttctggacacctggaaatatgccgttgatggtgacccaacagatagccagcaa
ctaaccgatgccgcctccaccttaacgagcgctgcagcaaaagcgcttctgacggggtcc
aaggatgaaatcgccaagattattcgtgacccgattattatcggcgccatcgccttcggc
ggtgttggcaatgcacgaggcattgttggcgaaggtactggtgttggtcgaggctcaaat
ggcactttgattgacgaaataacaggcagcatgccgccggtaaagccgttggttaatcct
gctacaaatcttgcgagtgaagccagggcaaaccatatcctatatggagacggtccgggg
agtggcggccatctttggccagggcaacccggcaaaacggcatttccagcaagctggaat
gcggataaggtgatgagtaccatttcggatatcgcaacggacccggcattaagttggaaa
cctcagaccgggaatggcggcctgtataccaaatcaggcaagcctgcgcgattcattgtg
acggatgctggcggtaatcttccggttatcgatggagtgccgatcagggtcgttatcgaa
ccggcaggcgagggcattatcacaggtttcccacaatattga
DBGET
integrated database retrieval system
