Rhizobium sp. Pop5: NE852_27160
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Entry
NE852_27160 CDS
T11439
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE852_27160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_27160
Transporters [BR:
rhip02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NE852_27160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
AAA_16
AAA_29
AAA_22
AAA_23
SbcC_Walker_B
nSTAND_NTPase5
RsgA_GTPase
NACHT
nSTAND1
TOBE
AAA_33
ORC-CDC6-like
AAA_5
Zeta_toxin
AAA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UVD59660
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Position
pRsp_Pop5_2:315267..316346
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AA seq
359 aa
AA seq
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MAHLAIEGVSKLFGTSFAVRDFSLEVGDGELVCLLGPSGSGKSTLLRMIGGFERPSGGTI
RIDAKDMTNLPPERRPTGMVFQSHALWTHMDVFNNIAFGLKLRRLSKSEIRERVESALAL
VGLADYGRRMTTQLSGGQQQRVALARSLVLEPKILLLDEPFASLDQHLRERLREEVRDIQ
QRLGITTLFVTHGQDEALALADRIVVMRDGRTEQIAPPSTIYRQPRTAFVAGFIGSMNFV
ESRTRNGVCEHALFPLAVPVEDGRVTLAARPEALTIRPSDRADAATVHRTTDFGTHKMVD
VDLADGTRLKAMVPPDVRIQAGTKVEPNFSSFFVFRDNALVHQSLPATSDAEAGRLLPV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcacatctggcgatcgagggcgtttcgaagctgttcgggaccagctttgccgttcgc
gacttctcgctcgaagtcggcgacggcgagctcgtatgcctgctcggcccgtccggttcc
ggcaagtcgacgcttctcaggatgatcggcggtttcgaacgcccgagcggcggcacgatc
cgcatcgatgcgaaggatatgacgaacctgccgcccgagaggcgcccgaccggcatggtg
tttcagagccacgcgctctggacgcatatggacgtcttcaacaacatcgccttcgggctg
aaacttcgccggctgtcgaaatccgaaatccgtgagcgcgtggagagtgccttagcgctg
gtcggcctcgctgactacgggcgtcggatgacgacgcagctgtcgggcggacagcagcag
cgtgtcgcgcttgcccgctcgctggtgctcgagccgaagatcctgttgctcgacgagccc
tttgccagcctcgatcaacacttgcgcgaacggctgcgggaggaggtgcgcgatatccag
caacgcctcggcatcaccacactcttcgtcacccacggccaggacgaggccctggcgctt
gccgaccgcatcgtcgtcatgcgcgacgggcgcaccgaacagatcgcgccgccgagcacc
atctaccggcagccgcggacggccttcgtcgcaggcttcatcggctcgatgaatttcgtc
gagagccgcaccagaaacggcgtctgcgagcatgcgctctttccgcttgccgttcccgtc
gaggatgggcgggtaacgcttgccgcccgtcccgaggctctgacgatccgtccttccgat
cgggcggatgccgcgacagtccatcgcacgaccgatttcggcacccacaagatggtcgat
gtcgatcttgccgatggcactcgcctgaaggcgatggtgccgcccgatgtgcggatccag
gccggaacgaaagttgagccgaatttctccagctttttcgtcttccgcgacaacgcgctc
gtccatcagtcgctgccggcaacgagcgatgccgaggccggacggctgctgccggtctaa
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