Rhizobium sp. Pop5: NE852_29345
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Entry
NE852_29345 CDS
T11439
Name
(GenBank) ABC transporter substrate-binding protein
KO
K17241
alpha-1,4-digalacturonate transport system substrate-binding protein
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NE852_29345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_29345
Transporters [BR:
rhip02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-1,4-digalacturonate transporter
NE852_29345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
UVD60687
LinkDB
All DBs
Position
pRsp_Pop5_1:299049..300335
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AA seq
428 aa
AA seq
DB search
MKTYLSGAFALALATVSFAWSSVAMAETQTITFLFTDDDQAYVERMEALSKEFETAHPDI
KVNFVSSGYDAVAKQLPVQLAIGEGPDVAKITDWQLAPYYLDMRPLMKDPDGFAKLHGDS
LNTLRFPGVNDPNSINGYVASQTFNLPFVNKTLFDQAKEPLPKPTATLKEIVEASARVAK
ATGAQIPFTMDRSGHRFSGAAFSYGSNYVKDGKFSFPDDAAKRYITDLYNWTKDGSFPKE
MWGAAGGTQYKNMGDEFVNGNVVTYIAGNWMVNPFQQKIGDGFDWTAISAPCGDAGCYAM
PGGTAIVGFKRTKYPQAVASFIEFLGSEKVQREIAENYVILTGANIKDPQYKLTSKNAKD
AMAVFLAARDSAPQAARDLERLKGSGAMYQLIVQRMSQLIVGELSLEDAFKAMSADVDKI
NVALAANK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctatctctcaggggctttcgcattggcgctggccaccgtttccttcgcctgg
tcgagcgtcgccatggcggaaacccagacgatcacctttctcttcaccgacgacgaccag
gcttacgtcgagcggatggaagcgctgagcaaggaattcgagacggcgcatcccgacatc
aaggtgaatttcgtttcgtcgggctatgatgccgtcgccaagcagctgccggtgcagctc
gccatcggcgaaggtcccgacgtcgccaagatcaccgattggcagctggcgccctattac
ctcgacatgcgcccgctgatgaaggatcccgacggcttcgccaagctgcacggtgacagc
ctgaacacgcttcgtttccccggcgtcaacgatccgaactcaatcaacggctacgtcgcc
tcgcagaccttcaacctgcccttcgtcaacaagacgctgttcgaccaggccaaggaaccg
cttccgaagccgaccgccacgctgaaggagatcgtcgaagcttccgcccgcgtcgccaag
gcgaccggcgcccagatccccttcacgatggaccgctcgggccaccgcttctccggtgcg
gccttctcctacggttcgaactacgtcaaggacggcaagttctcgttccccgacgatgcc
gccaagcgctacatcaccgatctctacaactggacgaaagacggctccttccccaaggaa
atgtggggtgctgccggcggaacccagtataagaacatgggcgacgagttcgtcaacggc
aacgtcgtgacctatattgccggcaactggatggtcaatccgttccagcagaagatcggc
gacggcttcgactggacggcaatcagcgctccctgcggcgatgccggctgctatgcgatg
ccgggtggtactgcgatcgtcggcttcaagcgcaccaagtatccgcaggccgtcgcctcg
ttcatcgagttcctcggctctgaaaaggtccaacgtgaaatcgccgaaaactacgtcatc
ctgaccggcgccaacatcaaggatccgcagtacaagctgaccagcaagaatgccaaggac
gccatggccgtcttcctcgcagcccgcgacagcgcgccgcaggccgcccgcgacctggaa
cgcctcaagggatcgggggccatgtatcagctgatcgtgcagcggatgagccagctgatc
gtcggcgagctttccctcgaagacgccttcaaggcgatgagcgcggacgtcgacaagatc
aacgtggcgctcgccgccaacaagtaa
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