Rhizobium sp. SRDI969: N2A41_14040
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Entry
N2A41_14040 CDS
T11552
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhis Rhizobium sp. SRDI969
Pathway
rhis03420
Nucleotide excision repair
rhis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N2A41_14040
03430 Mismatch repair
N2A41_14040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhis03400
]
N2A41_14040
Enzymes [BR:
rhis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N2A41_14040
DNA repair and recombination proteins [BR:
rhis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N2A41_14040
MMR (mismatch excision repair)
Other MMR factors
N2A41_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
UWM79848
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All DBs
Position
2782339..2784819
Genome browser
AA seq
826 aa
AA seq
DB search
MSNSFDEMPFFDEEPGEMARKPQPPAAPAERAPATGGGIAARAMAARDGGKRPDYLTGLN
PEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMK
ERIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQLIQAE
GLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLTTLNACD
FGDLLMHPIAIFRKNPDLLREYHGRFRYILVDEYQDTNTAQYMWLRLLAQRSKGEPQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRL
GKTLFTDRSDPDDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDALAYFRLVAQASDDLAFERIVNTPKRGLGDTT
VRALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTSHTELAE
QILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRC
HIWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAQMEQSYGGYGRGGYGQSRFDKAEPFA
NSYSTPGWKRAQANKTDATRDNWGTRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPS
RFTLGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgaaatgcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcacccgccgaaagggcgcccgccaccggtggcggcatcgcc
gcacgcgccatggcggcccgcgacggcggcaagcggccggattacctcaccgggctgaac
cccgagcagaccgaagccgtcgaaacgctggaaggccccgtcctcgtgctcgccggcgcc
ggcactggcaagacgcgggtgctcaccacccgcattgcccatatcctcaataccggccgc
gcctttccctcgcagatcctcgccgtcaccttcaccaacaaggccgcccgcgagatgaag
gagcgcatcgcgctgctcgtcggcggcgccgtcgaaggcatgccctggctcggcaccttc
cattcgatcggcgtcaaacttctgcgccgccacggcgagctcgtcggcctgcgctccgat
tttaccattctcgataccgacgacgtcgttcgcctgatcaagcagttgatccaggccgag
ggtctcgacgacaagcgctggccggccaagcagttcgccggcatgatcgacacgtggaag
aacaaggggctcggcccggccgatatccccgagggcgacgctcgcgcctttgccaatggc
cgcggccgcgatctctatttcgcctatcaggcgcgcctgacgacgctgaacgcctgcgat
ttcggcgacctgctgatgcatccgatcgcgatcttccgcaagaacccggacctcttgagg
gaatatcacggccgcttccgctatatcctcgtcgacgagtaccaggacaccaacaccgcc
caatacatgtggctcaggcttctcgcccagcgatccaaaggcgagccgcagaacgtctgc
tgcgtcggcgacgatgaccagtcgatctatggctggcgcggcgcggaggtcgacaatatc
ctgcgctttgaaaaggatttccccggcgccaaggtcatcaagctcgagcgcaactatcgc
tcgactgaacatatccttggcgccgccgcccatctgatcgcccataatgagggtcgtctc
ggcaagacgctgttcaccgaccgctccgatccggacgacgtcaaggtgcaggtccacgct
tcctgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagctccagcgc
ggcaagcatctcttgaacgacatggcgatcctcgtgcgcgcctcgttccagatgcgcgaa
ttcgaagaccgcttcgtcaccctcggcctcaactaccgcgtcatcggtggcccgcgcttc
tacgagcgcctcgagatccgcgacgccttggcctatttccgcctcgttgcgcaagcctcc
gacgacctcgccttcgaacgcatcgtcaacaccccgaagcggggcctcggcgatacgacg
gtgcgcgcgctgcacgactatgcgcgtgcccgcgatatcccgatgcttgcggcggccgcc
gacatcatcgagaccgacgagctgaagccgaaggcgcgaaaggcgctcttcgacgtgatt
caatctttccgccgatggcaggaactgcttgaaaacacatcgcataccgagctggccgag
cagatcctcgaagagtccggctataccgacatgtggaagaacgacaagagcgccgaagcg
ccgggccgccttgagaacctcaaggaactgatccgctcgatggaaagcttcgaatcgatg
cgcggcttcctcgaacacgtctcgctggtgatggatgccgagaccaacgagaaccttgat
gccgtctcgatcatgacgctgcactcagccaagggtttggaattcgacaccgtcttcctg
cccggctgggaggaaggcctcttcccgcaccagcgctcgctggacgagagcggccgcgcc
ggcctggaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcatcgctgc
cacatctggttcgtctccaaccgccgcatccatggcctctggcaatcgaccctgccctca
cgcttcctcgacgaactgccggaaacccatgtcgaggtcgctcaaatggaacagagctac
ggcgggtacggccgcggtggctacggccagtcccgcttcgacaaggccgaacccttcgcc
aattcctattccacgcccggctggaaacgcgcccaggccaacaagaccgacgccacacgc
gacaattggggcacccgctccggccacgccgtcgaacgcatcggctacggcgagagcggc
ccgaaggggcgcacgatcgaaggcgagctggttgccaaatcgacctcgtcggaaccgtcg
agattcaccctcggcgaccgcgtgttccacctgaaattcggcaacggcaacatcaccggc
atcgaaggcaacaagctgacgatcgagttcgaccgggccggacagaagcgggtcttggac
gggttcgtcgagcgcgtgtga
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