Rhizobium sp. SRDI969: N2A41_20580
Help
Entry
N2A41_20580 CDS
T11552
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rhis Rhizobium sp. SRDI969
Brite
KEGG Orthology (KO) [BR:
rhis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhis03036
]
N2A41_20580 (xerD)
Chromosome and associated proteins [BR:
rhis03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
N2A41_20580 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
HTH_MmpR5
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
UWM81035
LinkDB
All DBs
Position
4152643..4153596
Genome browser
AA seq
317 aa
AA seq
DB search
MVDLGRVHVESFLEMMSAERGAAANTLQSYERDLDDIRSFLKERSIRLTEAASADLAAYL
SSLARKGFKPSSQARRLAAMRQFYKFLYAEGLRTDDPTGILDAPKKGRPLPKTMGVEEVG
RLLSQAEAEADDAAPGQLQRLRMLALLELLYATGMRVSELVSLPARVLDQEGRFLMIRGK
GNKERLVPLSQSAISALKSYGRRLASENAAVKEPQESPWLFPSASKEGYLPRQVFARDLK
NLAIRAGLTPSLISPHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLQ
QLVQTHHPLAKQAKKHE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggtggatctcggccgcgtccatgtggaatccttcctggagatgatgagcgccgagcgg
ggtgctgccgccaacacgctgcaatcctatgaacgcgatctcgacgatatcagatccttc
ctgaaggagcgcagcatacggctcaccgaagccgcctccgccgatctcgccgcctatctc
tcctcactcgcccgaaagggcttcaaaccctcctcccaggcgcgccggcttgcggccatg
cggcagttctacaagtttctctacgccgagggcctgaggaccgacgaccccacaggcatt
ctcgacgcgccgaagaagggccgtccgctgccgaagacgatgggcgtcgaggaggtcggc
aggttgctttcgcaggccgaggccgaagccgatgatgcggctccgggccagctgcagcgc
ctgcgcatgctggcgctgctggaactgctctatgccaccggcatgcgtgtcagcgaactt
gtctcgcttccagcccgtgtgctcgatcaggaaggccgtttcctgatgatccgcggcaag
ggcaacaaggagcggctggtgccgctgtcgcaatcggcgatatcggcgctgaaatcctac
ggccgccggctggcgagcgaaaatgcagcagtgaaggagccgcaggaaagcccctggctg
tttccctccgcctcgaaggagggatatctgccgcgccaggttttcgcccgcgacctcaag
aacctggcaatccgcgccggcctgacgccgtcgctgatctcgccgcatgtcatgcgccac
gcctttgccagccacctgctggccaacggcgccgatctgcgcgtcgtacaggaactcctc
ggccattcggacatttcgaccacgcagatctacacccatgtcctcgaagagaggctgcag
cagcttgtccagacgcatcacccccttgccaaacaggcgaaaaagcacgaatag
DBGET
integrated database retrieval system
