Rhizobium sp. SRDI969: N2A41_20960
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Entry
N2A41_20960 CDS
T11552
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhis Rhizobium sp. SRDI969
Pathway
rhis00020
Citrate cycle (TCA cycle)
rhis00190
Oxidative phosphorylation
rhis00650
Butanoate metabolism
rhis00720
Other carbon fixation pathways
rhis01100
Metabolic pathways
rhis01110
Biosynthesis of secondary metabolites
rhis01120
Microbial metabolism in diverse environments
rhis01200
Carbon metabolism
Module
rhis_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhis_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhis_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N2A41_20960 (sdhA)
00650 Butanoate metabolism
N2A41_20960 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
N2A41_20960 (sdhA)
00720 Other carbon fixation pathways
N2A41_20960 (sdhA)
Enzymes [BR:
rhis01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
N2A41_20960 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
HI0933_like
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
UWM81102
LinkDB
All DBs
Position
complement(4235919..4237760)
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AA seq
613 aa
AA seq
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MAPTSPAQNGKAYKYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVA
AQGGIAASLRNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFSR
NEEGKIYQRPFGGHMQNYGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFAL
DLIMSEDGSRCTGVVAWCLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMV
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKAKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTHEPI
PVLPTVHYNMGGIPTNYWGEVLNADGANPERIIPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRAAPIPHLNVAACDKIMDRFDGLRHASGGTPTAELREKMQRAM
QEDAAVFRTQESLESGCRRISAIWGEMKDIKVTDRSMIWNSDLVETLELQNLMANAITTI
YGAEARKESRGSHAREDYAEGAFAGRDDVNWRKHTLAWVDEAGDVKLDYRPVHTELIAEG
IDPHKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacttcacccgcccagaacggcaaggcctacaagtatgtcgatcactcctac
gacgtgatcgtcgtcggcgccggcggcgccgggctgcgtgccacgctcggcatggcagag
cagggtttccgcacggcctgcatcaccaaggtattcccgacccgctcgcatacggtcgcg
gcccagggcggcatcgccgcttcgctgcgcaacatgacgccggatagctggcagtggcac
ctctacgatacagtcaagggttccgattggctcggcgacgtcgacgccatgcagtatctc
accatggaagcgccgaaggcggtctatgagctcgagcattacggcgtgccgttctcgcgc
aacgaggaaggcaagatctatcagcgcccgttcggcggccatatgcagaattacggcgaa
ggcccgccggtccagcgcacctgcgccgttgccgaccgcaccggccacgccatcctgcat
acgctctacggccagtcgctgcgcaacaatgccgaattcttcatcgagtatttcgcgcta
gacctgatcatgtcggaagacggcagccgctgcaccggcgtcgtcgcctggtgcctcgac
gacggcacgatccatcgcttcgccgccaagatggtggtgctggcgaccggcggctacggc
cgcgcctatttctcggcaacatcggcccatacctgcaccggcgacggcggcggcatggtg
gcgcgtgccggcctgccgctgcaggacatggaattcgttcagttccacccgaccggcatc
tacggttcgggctgtctgatcaccgaaggcgcgcgcggcgaaggcggttacctcgtcaac
tccgagggcgagcgcttcatggagcggtacgcgccttcggccaaggaccttgcctcgcgc
gacgtcgtttcgcgctgcatgacgcttgagatccgcgagggccgcggtgtcggcaaggcg
aaggaccacatcttcctgcatctcgaccatctcgatccggccgttcttcatgaacgcctg
ccggggatttccgagagcgccaagatcttcgccggcgtcgacgtcacgcacgagccgatc
ccggttctgccgaccgttcactacaatatgggcggcattcccacgaattattggggcgaa
gtgctgaacgccgacggcgccaatcctgaacggatcatccccggcctgatggctgtgggt
gaagccggctgcgcctcggtgcacggcgccaaccgcctcggctccaactcgctgatcgac
ctggtggtcttcggccgcgccgcggcgatccgcgccggcgaggtgatcgaccgcgcggcg
ccgatcccgcatctcaatgtcgccgcctgcgacaagatcatggaccgtttcgacggtctg
cgccacgccagcggcggcacgccgacggcagaactgcgcgagaagatgcagcgtgccatg
caggaagacgccgccgtcttccgcacgcaggaatcgctggaatccggttgccggcgtatc
tcggcaatctggggcgagatgaaggacatcaaggtcaccgaccgctcgatgatctggaac
tccgacctcgtggagacgcttgagctgcagaacctgatggccaacgccatcacgacgatc
tacggcgctgaggcccgcaaggagagccgcggttcgcatgcccgcgaggactatgccgag
ggtgcattcgccggccgcgacgacgtcaactggcgcaaacacacgctcgcctgggtggac
gaggcaggcgacgtgaaactcgattaccggccggtccacaccgagctgatcgcggaaggc
atcgatccgcataagatcgagccgaaggctcgcgtgtactga
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