Rhizobium sp. SL42: IM739_05940
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Entry
IM739_05940 CDS
T11805
Name
(GenBank) DUF3320 domain-containing protein
Organism
rhiu Rhizobium sp. SL42
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
DUF3320
AAA_12
AAA_30
AAA_19
SLFN-g3_helicase
ResIII
Viral_helicase1
DUF559
DEAD
Mg_chelatase
AAA_16
DUF2726
IstB_IS21
UvrD-helicase
Adeno_IVa2
AAA_22
NAT10_TcmA_helicase
DUF1263
FtsK_SpoIIIE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UJW76754
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Position
1268525..1274497
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AA seq
1990 aa
AA seq
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MQFSEMSGTENQQVSKPDNPAIVADIAACFTYASYQNAIPVIRSISVENNTDRHFENCRI
ELTAAPAFLRPKSWIVDRLVPGDRLVLADRKVEFDPGYLSGLNEAERGEITLRMSSGGQA
LDERRLPVRLLARDEWGGVADMVQLLPAFVMPNDPGVAAVLRMAAERLNAHGHSGGLDGY
QSNNPQRAYMLAAAVYSAIAGIGLHYAEPPASFENRGQKIRRPSTVAEERLATCLDTTLL
FAAGLEAAGLNPVILMFEEHAAVGVWLAKRTFAHAVEPDQMEVRKALSSRELIVFETTGV
THRPAMTFESALRALDGRLGVDEAHAFVAAIDVRRSRSGGIMPLASHEPIRRNVQEDDSA
LVADLPLPSAPSFAEMPAETVEVKPTNAAGRIDRWQKKLLDLTLRNRLLNFPDSKKTIPF
LCTDVAYLEDRLANGAAIRIISLPEQNPLGERDAALYRDVHGRDLQRGFAAEALLRDELP
STLDARQLEARLIDLYRQVRNDYAEGGANTLFLAVGFLRWKKKPEDERSYRAPLLLVPVK
LERRSASSRFTIRFHEDEPRFNATLLQFLERDFDLSLPQFNGDLPLDDNGIDVPRVLALM
RQAIRDVPGMEVVDETALSTFSFAKFLMWKDLVERTDALRENRVVRHLIDTPEQAFHEGS
GETTFRDERELDQAYAPADIICLLPSDSSQTAASLAAAEGRDFVIVGPPGTGKSQTIANM
IANCLAVGKTVLFVAEKTAALDVVYRRLRTHGLGDHCVELHSNKADRRHFLGQLKAAWEH
GGRNDASEWIAINERLRLRRDELNAYVGALHKRYSNGWTPYLALGIALKAAEAPAPGLSW
LERDAHDSQTLRELEDLANELGLVFGSVERQPALDLINVNEWSSGWQDGVMAAAQSLLNA
IELLVESANGFVARLGLKPQERLSRIELQALLSLAGVLQKSRGHDVSIVFDRDFPRCAEA
LESLASSISAYREAEREAAASYSSSAVRDLEVDVLDRQWREASASFWPNAMLGKRKVQKL
LQSYAEQGSVDPERDLPLLRRMKDCLSAIDQNLLNGKPLPVDGLATDVGAVAAVLDIARE
LRAIIPLPGRDQDETRTTLRALAPCLRAVVQDDVVRHAGDRLLAAVDGMKEAQRRFSTIA
GRDSLFGKDGADLATLRDKLDALIGARHLLRDWSAWCRIRNQAVQANLSSLVEQLETGAI
RPDETRAAFRLGYARWWLAKVLDADPVLRNFRRFQHENAISEFRDIDDLVRSHATSRVIS
AIAHGLPPVQSVPRNSELGLLRYQMELQRPSQSIRDMISKMPQSFSKLAPCMLMSPLSIA
QYLPPNQALFDVVIFDEASQITTWDAVGAIARARQTIIVGDPKQLPPTNFFGRNEEEEDV
ADHEKDLESILDEAKAAGIPTRDLRWHYRSRSESLIAFSNHHYYQNRLVTFPSPVVEDRA
VHLRKVPTGVYDRGKSRTNRPEADAVAREAVSRMKAWLKLPETDRPTLGVITFNAQQQSL
ILDLLDAARRDEPELEWFFAEERVEPTIVKNLENVQGDERDVILFSITFWKDTAGKLTMD
FGALNRDGGERRLNVAVTRARQELVVFSGFTADQIDPTRTKALAVHHLKTFLDYAERGPI
ALPAADIGSIGGLESPFEEAVAAQLERRGWRIVPQVGVSGFRIDFGIRHPDLAGTFLAGI
ECDGATYHRSATARDRDKVREQVLRGLGWNILRVWSTDWWFDATGCAERLHGSLEALLEE
SRARRTAETESVVIRWDMGHDVEGTEEDRIDDARTSVEPIELPPGAFETERVSAEARPLS
SKPQTPEMPPTPTLVGDKTSNERGYTVTDLSSFRAEPDQFFEFGYRDTLRRMIEAVIETE
SPLRADILAQRISRAHGWLRTGGRIRERIDLHLRGYDTTKESSGEFIWKAGTVSKIMPYR
QPTSEEARRSIADIPIAELASVVSDNPDLLDQPDPARDLARLLGVERLAAVSRARLDEAI
AVARSHASII
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcagaaatgagtggcacggagaaccaacaggtcagtaagcccgacaatcct
gccattgttgccgatattgccgcatgcttcacctatgcgtcctaccagaacgcaatcccg
gtcatccgatcgatctcggtcgagaacaatacggacagacacttcgagaactgccgtatc
gagctgacggcggcgccagctttcctgcggccgaagtcatggatcgttgatcgcctggtg
ccgggggatcggcttgtgctcgcagatcgaaaagtggagttcgatccaggatatctttca
ggactaaatgaagcagagcgcggtgagatcactctccgcatgtcgtctggcggacaagct
ctggacgagcggcgccttcccgtcagactcctagcgcgtgacgaatggggaggcgttgct
gacatggtgcagttgctcccggcctttgtcatgcccaacgatcccggtgtggccgccgtt
ctgcgaatggctgcggaaaggctcaatgctcatggccattcaggtggactggatgggtac
cagtcaaacaatccccagcgcgcctatatgctggctgcggcagtctactcagcgattgca
gggatcgggttgcactatgcagagccgcctgcaagcttcgagaatcgcggccaaaagatc
cggcgtccgagcacggtcgctgaggagcggctcgccacctgcctcgataccacgcttctt
ttcgccgccggcttggaagccgctgggttgaatcccgtgatcttgatgtttgaggagcat
gctgccgttggtgtgtggcttgcgaagagaaccttcgctcatgccgtagaaccggaccag
atggaggttcgcaaggcattgtcatcgcgcgagttgatcgtctttgaaacgaccggcgtg
acacatcggcctgccatgaccttcgaaagcgcgcttcgagcactggacggccggcttgga
gtggacgaggcccatgcttttgtggccgctattgatgtcaggcgatcgcgtagcggcggt
atcatgccgcttgcctcacatgagcctatccgccgcaatgttcaggaggatgactcggcc
cttgtggccgacttgccgcttccctccgcccccagttttgctgagatgcctgctgaaacc
gttgaggtaaaaccaaccaacgctgccggtcgcatcgatagatggcagaaaaaactgctc
gatctgacgcttcgcaatcgacttctcaatttcccggattcgaagaaaacgatcccattt
ctctgcacggacgtggcctatctcgaagatcggctggcgaacggcgcagcaatacgcatc
atatccttgcctgagcagaacccgctcggtgaacgggatgcagcactttatcgggatgtc
catggccgggatctccaacgtggcttcgcggcggaagcattgcttcgggacgagttgccc
tcaacactcgacgcgcgccagctcgaagctcggttgatcgatctctaccggcaggttcgc
aacgattatgctgagggtggcgccaacactctttttctggcggtcggattcctcaggtgg
aagaagaagccggaagacgagcgcagctatcgtgcgccgcttctacttgtccccgtcaaa
cttgagcgccgcagcgccagttcacgcttcaccatccgcttccatgaagatgagccgcgt
ttcaatgcgactcttcttcagtttctggaacgggattttgacctgtccctcccgcaattc
aacggcgacctgccgctcgacgacaatgggatagacgtgccgcgcgtcctcgcattgatg
cgccaggcaatccgcgatgttccggggatggaggttgtggacgaaacggccctgtcgacc
ttctccttcgcaaaattcctgatgtggaaggatctcgtcgaacgcaccgacgccttgcgc
gagaacagggtcgttcggcacttgatcgatacgcctgagcaggcctttcatgaaggaagc
ggagaaacgacgttccgcgacgagcgcgagctcgatcaggcttatgcgccagcggacatc
atctgtcttcttccatcagactcgtcgcaaacggcggcgagcttggccgcagccgaaggg
cgggattttgtcatcgttggcccgcccggcacgggcaagagccagacgatcgccaacatg
atcgccaactgtcttgccgttggaaagacggtgctgttcgtcgctgaaaagacggccgcg
ctcgatgtagtttatcgccgcttgcgaacacatggtcttggagatcattgcgtcgaactg
cactcgaacaaggcagatcgccgccatttccttggtcagctgaaagcggcctgggaacat
ggtggacggaatgatgcgtctgaatggatcgcgatcaacgagcgccttcggttgcgtcgc
gacgagctgaatgcctatgtcggcgcactacacaaacgctactcaaacggatggacgccc
tatctggcgttagggatcgccctcaaggccgcggaggcaccggcaccaggcttgtcatgg
ttggaacgtgacgcacatgactcacagacgttacgcgagctcgaagatctcgccaacgaa
ctcggtctcgtcttcggttcggtcgaacgtcagccggcactcgacctcatcaatgtcaac
gaatggagttccggctggcaggatggcgtgatggcggcagcacagtcgctgctgaatgcg
attgaactgttggttgagtcggcgaatggatttgtcgcccgcctcggcctcaaacctcag
gagcggctgtcacgaattgagctgcaggcactgttaagcttggcaggggtgctgcagaaa
tcgcgcggccatgacgtatctatcgtttttgatcgggattttccccgatgcgcggaagcg
ctagaaagtctcgccagctccatcagtgcctatcgcgaagcagagcgcgaggctgctgct
tcttacagttcctccgcagtccgcgacctcgaggttgacgtcctggatcgccagtggcgt
gaggccagtgcttcattctggccgaatgcgatgctgggcaagcgcaaggttcagaagctc
ctacagagctatgctgagcagggctccgtggatccggaacgggatcttccccttttgcgg
cgcatgaaggattgcctttcggcgatcgatcagaatctcttgaacggcaagcctctaccg
gtcgatggtctggcgacagatgttggagccgttgcggcagtgctggacattgcgcgggag
cttcgtgcgataatcccgttaccgggccgcgatcaggacgagacccggacgacgctccgc
gctcttgcgccgtgtcttcgtgcggtggttcaagacgatgtggtccggcatgcaggcgac
aggttgctggcggcggtcgacggtatgaaggaggcgcaaaggcgcttcagcacgatcgcc
gggcgcgacagtctttttgggaaggatggtgccgacctcgcgacgttgagggacaaactc
gatgcccttatcggcgcaaggcatctgcttcgtgattggtcagcctggtgccggatcaga
aatcaggccgtgcaggcgaatctgtcatcgctggtcgaacagctcgaaacaggcgcaatc
cgacctgatgaaacacgggctgcgtttcgcctgggctatgccaggtggtggcttgcaaag
gtcctcgacgccgacccggttttgcgaaactttaggcgtttccagcacgagaacgcgatc
agtgaatttcgcgacatcgacgatctcgtgcgctcacacgcgacatcgcgcgtcatcagt
gcgatcgcccacggattgccgcccgtgcagagcgttccacgtaattcggagcttgggctg
ctgcgctatcagatggagttgcagcgaccgagccagtccatacgggatatgatcagcaag
atgccgcagagcttttccaagctcgccccctgcatgctgatgtcacccttatcgattgct
cagtatctgccaccgaaccaagcgctgttcgatgttgtgatcttcgatgaggcgtcgcag
attacgacttgggacgctgtgggggccatcgcgcgggcccgccagacgatcatcgtcggc
gatccaaagcagctgccgccgacgaacttcttcggacgcaacgaggaagaggaagacgtc
gctgatcacgagaaagaccttgagagcattctcgacgaggcgaaggctgccggcatccca
acgcgcgatctgcgatggcactaccgcagccgaagcgagtccctgatcgccttctccaat
catcattactatcagaaccggctggtgacttttccgtcgccggtcgtcgaagaccgtgcc
gtgcacctgcggaaggtcccaactggtgtctatgaccggggcaagagccgcaccaatcga
ccagaagcggatgctgtcgcaagagaagcagtttcccgaatgaaggcatggctgaagctg
cccgaaaccgatcgcccgacgttgggagtgattaccttcaatgcgcagcagcaatctctg
attctcgatcttctggatgccgcgcgccgcgatgagccggaactcgagtggttttttgcc
gaagagcgggtcgagcccaccatcgtcaagaacctggagaacgttcagggcgatgagcgt
gacgtcattcttttctcgatcaccttctggaaggataccgcaggcaagctgacgatggac
ttcggtgcgctgaaccgcgatggaggcgaacgtcgcctgaacgtcgcagtcacacgtgcc
cggcaggaacttgtcgtgttctcgggattcacggccgaccagatcgacccgacacgcacc
aaggcactggccgtgcatcacctcaagactttcctcgactatgccgagcgcggtccgatc
gccctgccggctgccgatatcggctccatcggcggtctcgagtctccttttgaagaggcc
gtggcagcgcaactggaacggcgcggctggcgtattgtgccgcaggtcggcgtctccgga
ttccggattgatttcggcatccgccacccagacctagctggcaccttcctcgctggcatc
gaatgcgacggggcgacctatcaccgatccgccaccgccagagaccgcgacaaggtccgt
gaacaggtgttgagaggtctcggctggaacatcctccgcgtctggtcgaccgattggtgg
ttcgatgccacaggctgtgccgagcggcttcatggcagcctggaggccctgttggaggag
agccgggcccgtcgtaccgcagaaacggaaagcgttgtgatccgctgggatatgggacac
gatgttgaagggacggaagaagatcgtatcgacgacgctagaacgtccgttgagcccatt
gagttgccgccgggcgccttcgagaccgaacgcgtttctgcggaggcgcggccactgtcc
agtaagcctcaaactccggaaatgccacccactcccaccttggtcggcgacaaaacttcg
aacgagcggggatacacggtcaccgatctttccagtttccgagccgagccagatcagttt
tttgaatttggctatcgcgataccctgcgccgaatgatcgaggcagtcatcgaaaccgaa
agcccgttgcgcgcagacattcttgcccagcgtatatctcgtgcgcatggctggttgcgc
acgggcgggcggatccgggagcggatagatctccacctccgcggttatgacacgaccaag
gagtcgagcggcgaattcatatggaaggcgggcacagtttcaaaaatcatgccctatcgg
cagccgaccagcgaggaagcgcgcaggtcgatcgcagatataccgattgcggaactcgcc
tccgtcgtctccgacaatccagatctgctggatcagccagatccggcgcgtgatctggct
cggttgcttggtgtcgagcgcctcgccgccgtttcccgcgcaaggctggacgaagcaatt
gcagtggcgcggtcgcatgcgtcaatcatctaa
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