Rhizobium sp. SL42: IM739_06030
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Entry
IM739_06030 CDS
T11805
Name
(GenBank) hypothetical protein
Organism
rhiu Rhizobium sp. SL42
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPM
FG-GAP_3
Rib_hydrolayse
WHD_4th_Lhr
Motif
Other DBs
NCBI-ProteinID:
UJW76043
LinkDB
All DBs
Position
1310374..1317762
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AA seq
2462 aa
AA seq
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MTDIKSAVAALQNADSIEEIYRIASRLPATAKGTGGALYSGSFVEGVSYAQFAVESGLNI
IDHTPRAIFLSDPNVYSAIENILLDQGVDAKAASKQAEAILFEATDKSLWGQASKEFAAS
LSGDIKLFVGKNTTISRVFGQIELPQILNNTKINTINGVSLSAASKAGAAEFFARVVAAN
ESVTRAVVGSSIVTLTGNIMGLSESRVLGGVVGVSARTVNALVGTVLGGALLDVLLSAEE
LNVGEDAALRAINRENAEANFYGGAAGVGPSLTEPTTSYHHTDILNTTAYTTTTAVEAGS
VSAPRMTTLDVSSLTGKSGSGSGSKFGDKEKERKERGDLNKHRGWNYSGGGGGGGPDPYS
TVLPTIVVEGIRSPAKTSKAKPILLDLDGNGLTITKLDDSSHFFDIHGDGYQHRAAWAGT
GDGVLVFDADSDGKISNRKEVVLTDWDPSADSDMEALRQVFDTNGNGLLDSGDANWLQFK
VMVTMPDGTTVMKTLAELGIQSLTLVADETRYEFADGSSIDGEATFTRTDGTTGKTATAS
LMIDANGYAVSTSTTVDADQNTVLTTKALNKDGSLASETVRTTSADGLTVRTRFDNDGDG
VIDRVLTDVTELLTDGTKRRTETSRNGAGVLIGSTVTQTSVDRTLIQIDRDQLGGGFTTE
SETQQTSVDGSLTITISKKAADGSVVSSERTEFSGDRLSRTDSIDLDGDLAYERSVTSQT
VKNADGSITKRDNIHAGNGDLLTETVAAISADGLVRSEAADLNGDGLLDRSISGVTTRNA
TSGATEIVEQTKARDGSLVSMSSTTVSSDGLNKVVSTDADGDGVFDRVVSDVTVIAADQS
RTQTVTTHSASGALLSNTVTVRAADGLTGSKSIDGDGDGLFEQVTSVAKAADGQTVQTSQ
SYSADGTLLSKSVSTTSVDGLSTIVRNDRYGLGTDDQILTETTVKNADGSAQQTVEQRSG
SNALLQRSVVTESANGLVIRTQADSDGDGQHDRDLLDSTVVGSDGSQTRTIETRSGNGSL
LSGETIVTSHDRLLVTRTVDVDGDGQANVRQVSQTASDGAKTTTEEILNDLGQVVSSKQT
TTSANGLVQATTQDVDGNGTVDSRISTAIVLGVDGGKTTTKRTIAGDGTLLREDVTSQNG
NGLLVIASSDLNGDGVVDVSTRSETTLNADGSTTAAVTQKSGSSTTSVKTSTQSANGLAS
LVASDLDGDGDIDRTVQNTKQLLANGGVVETQQVRAQDQTLVSVQTVETSANGKSVTSSL
DRDGDDNVDEIRIREVLADGSVRTTTTGRNASGAVISTATETVSRNGLETVLAIDSNGDG
TTDRTKSAKTEVLADGSQRVTRTEYSGTSTLVERSVTTTSGNGLQSNTIWSDATGATTRS
HERLTVLAQDGGKVTTETFRKADGSLESTQTLSEAGNGNSTILTRDINGDGKLDDRITES
GLDNGTTTTLHQNLKTDGTVSAAKLVTTSADELTVMTLYDGNGDGTYETRVVSKSEPLAD
GSSRTTMTQESLVSGAWQLKGKTVTTTSGDGLTTSKQWDDTGAGTFGLSRTSLIVLGADG
SRVTTDRMLTNGVTTRIDEHKVSADGLTITERADLNGDGTFDQTLTDVTVLNADGSKTRS
ETATKPDGSTISSRVTTVSKDGLNTSVAETSNVAGWVARTTSIVTSLLADGSSRTVKSVK
NAGGQLIESETVDKTADGRTTAILRDRNGDGIVDHREVETRFADGRVSLVETTYGSTGNV
VSSVSSITSANGLRTVIDTDKNGDGVLDLKKTIDRQTFADGSTKVVTTVVNATTNAVKSR
TEETVSADGTLRLESTDVNGDGTADQTVREELLPSGIRKTTVTNNAAAKASSEIRVGEIY
WSDTIPTKIETTVSVDGMTRNIRMDIDGNGVFEVTATAVTQIDGSTVTTITETNANGTVK
ANGTLTQSHDGRVSVLSADTQNDGVIDSIITTTSMVDGAVEKVAIKKSAAGAVTETKTSK
IDALGNLLSSETLDGSNRKIEAYVWQADLTATRTRYQATNGAISSLETFTAEGKIKAATH
FDALGAQAWTRIEQVFNASEQKLSETQFMDDGTKWVTTYDLANAKTWKEYVQNFDKAGRQ
IGVYQDNDNGTSVRYLFDPANSQAWSSVETRYDTAGKATFEVMNYDNGRRSDATFDVNNA
ASWKNIVRTYDSSNRLLEESILNDNNTRDVNYFDTDNTQGYSKGIKFYESNGVLAREVIY
ENNPVNYYRHTYDALNNQTWIKKTQYYQALSLVRTEIWYDNGTYTRKTEDPNRRPIVVDL
DGDGQVSITENTSVGGVRFDWDGDGSADTTAWVGPGDGLLVIDLAADGSAGSDGSIDQAR
EIAFSMWPADTDENPVSDLEGLRIAFDTNGDNVLDSHDTRWNEFRIWQDLNQNGVSDAGE
LRSMSEAGIKLFNLLPSTEGAITFADGSAITGTSTYETMDGLKHLAADATFAFTPSRQGV
TA
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatcaagtctgctgtcgcagctcttcagaatgctgactccatcgaggaaatc
tatcgtattgcatcccgacttcccgctacggccaaagggacgggtggggcgctctactcg
ggaagttttgtcgagggcgtttcttatgcccagttcgctgtagagagtggattgaacata
attgatcacacccctcgagcaatatttcttagcgatccaaatgtatattctgcgatagag
aacattttattggatcaaggcgtcgacgctaaggcggcgtccaagcaagctgaggctata
ctatttgaggcaacagataagtcattgtgggggcaggcatcaaaagagtttgcggcttcc
ttgtctggtgatataaaattgttcgttggtaagaatactaccatctcccgcgttttcggc
caaatcgagcttcctcaaatacttaacaacacaaaaatcaatacaattaacggcgtctcc
ctttcggcggcctcaaaagcgggcgccgcagaattctttgcgagagttgttgcggcaaac
gaatctgttacgcgcgccgttgtgggtagttcgattgttacgctcacgggcaatattatg
gggctatccgaaagccgcgttctcggaggggttgttggtgtctctgcccgcacagtaaat
gctctggttggaacggtgttggggggagcattgcttgacgtgcttttgagcgcggaggag
ctcaacgttggcgaagatgcggctctgagagccatcaatcgtgaaaatgcggaggccaac
ttttacgggggggctgcaggtgttggaccgagtttgacagaaccgaccacttcgtatcat
cacaccgacattctcaatacaaccgcttacacaacgacgacggcagtcgaagcaggttct
gtcagcgctcccaggatgacgacactggatgtatcatcactcactggaaagtctggatcg
gggtcaggatctaagttcggcgacaaggagaaagagaggaaggagagaggcgatctgaac
aaacacagggggtggaactacagtggaggagggggaggaggaggtcctgatccatactca
acggtgcttccgacaattgttgttgaggggattaggtctccggcgaaaacgtctaaagca
aagcccatcttactcgaccttgatggcaacggcctgaccatcactaagcttgatgatagt
agccattttttcgacatccacggggacggctaccagcatcgcgcagcctgggcaggaact
ggcgatggtgtcctggtttttgatgccgacagcgacggcaagatatccaaccgcaaggaa
gtggtactaacggactgggatccttcggccgacagcgacatggaagcgctgcgccaggtg
ttcgacaccaatggcaatggccttctcgattccggcgatgccaattggctgcagttcaag
gtcatggtgaccatgccggacggcacgactgtgatgaaaacgctcgccgagctcggtatc
cagtcactgaccctggttgccgacgagacgcgttacgaatttgccgacggttcctcgatc
gacggtgaggcgacatttaccagaaccgacggaaccacgggcaagactgcaacggcgtcg
ttgatgatcgacgccaatggatatgcggtcagcacttcgacgacggtcgatgctgaccag
aatacggtgctgaccacgaaggcactgaacaaggatggttcgctggcttccgaaacggtg
cggaccaccagcgctgacggattgaccgtcaggacgcgcttcgacaacgatggcgatggt
gtcatcgatcgcgtcctaacggatgtgaccgagcttctgacggatggcacgaaacgccgc
acggaaacgtcccgcaatggcgccggcgtgctcattggctcaacggtcacacagaccagt
gtagatcgcacattgatccagatcgatcgcgatcagttgggcggcgggttcacgacagag
agcgagacgcagcagacctcggtagatggaagcctgacgatcacgatctcgaagaaggcg
gctgacggctcggttgtttcctcggagcgcaccgaattctccggcgacaggttgagccgc
acggacagtatcgatctcgacggcgacctggcctatgagcgttcggtgacatcgcagacg
gtcaaaaacgcagacggatcgatcaccaagcgcgacaacatacatgccggcaacggcgac
ctgcttacggaaaccgttgctgctatctcggcggatggccttgtccggtcagaagccgcc
gacctgaatggcgacggactgctcgaccgcagcatttccggtgtcacgacccgcaatgcg
acctctggtgcgaccgagattgtggagcagacgaaggctcgcgacggctcgctggtttcc
atgtcttccacgacagtatcgagcgacggcttgaacaaggtggtttccaccgacgcggac
ggcgatggtgtctttgatcgcgtcgtctccgatgtgacagtgattgccgcggatcaatcg
agaacccagacggtgaccacgcatagtgctagtggcgcactgctatcgaacaccgtgact
gtgcgggccgcggacggcctgacagggtcaaagtccatcgatggcgatggtgacggattg
ttcgagcaggtgacaagcgtcgccaaggcggctgacggccagacggttcagacgagccag
agctattctgcggatggcacgcttctttcgaagtccgtttcgaccacaagcgtcgacggt
ctgtccacaatcgttcgcaacgatcgatatggccttgggactgacgatcagatcctgacg
gagacgactgtcaagaacgcagatggcagcgcacagcagacagtcgagcagcgaagcggc
agcaatgcgctgctacagcggagtgtggtcaccgaaagcgccaatgggttggtgatccga
actcaggctgacagcgacggcgatggccagcatgatcgcgatctcctggacagcacggtg
gttggttctgacggcagccagacgcgaaccatcgagacccgtagcggcaatggttcgctg
ctgtccggcgaaacgatcgtgacgagccatgatcgcctgctggttacgcgcacggtggat
gtcgatggcgatgggcaggcgaatgttcgccaggtcagccaaacggcgtctgatggcgcc
aagaccaccaccgaagagatcctgaacgatctcgggcaggttgtctcaagcaagcagacg
acgacgagcgccaatggcctagttcaggcgacgacgcaggatgtcgatggcaatgggacc
gttgacagccgcatttcgactgcaattgtcctcggcgtggacggcggcaagaccacgacg
aaacggacaatagctggtgacgggacgctcctgcgggaggatgtaaccagtcagaatggc
aatggcttgttggtcatcgcctccagcgatctgaacggtgatggcgttgtggacgtcagc
acccgctcggaaacaacgctgaatgcggacggttcgaccacggcggcggtgacacagaag
tccggcagctcgaccacaagcgtcaagaccagcacccagagtgcgaatggcttggcgagc
cttgttgcgagcgaccttgacggtgatggtgatatcgaccggacggtccagaatacaaag
cagctcctggcgaatggcggggtggttgagacccagcaggtccgcgcgcaggatcagaca
ttggtgtcagtgcagaccgtcgagacatctgcaaacggcaaatcggtcacaagctcgctg
gatcgagacggcgatgacaatgttgatgagatccgcattcgtgaggtgctggcagacggt
tctgtccggaccaccaccacaggacgaaacgcatctggcgcggtcatcagcacagccaca
gaaaccgtcagtcgcaatggcctcgaaacagtgctggcgattgacagcaacggggacgga
acgaccgatcgcaccaaatcggccaagacggaagtccttgctgatggttcgcaacgggtc
acgaggactgagtattccggcacatcgacgcttgtagaacggtcggttacgacgaccagc
ggcaatggtctccagtcgaacacgatctggagcgacgccaccggtgccacgacacgatcg
catgaacggctgacagtgcttgcgcaggacggcggcaaggtgaccaccgagaccttccgg
aaggcggatggcagtctggaaagcacgcagaccctttctgaagccggcaatggaaactcg
actatcctgacgcgagacatcaacggtgacggcaagcttgatgacagaatcacagagtcg
ggcctcgacaatggcacgacgaccacgctccatcagaacttgaagacggacggcaccgta
tcggccgcgaagctcgtgacgaccagcgctgatgaactgaccgtcatgacgctctacgac
ggcaatggtgacggtacctacgagacgcgcgtcgtctcgaagtccgagccgttggctgat
ggcagctcgcgcacgacgatgacgcaggaatccttggtcagcggtgcctggcagctcaag
ggcaagaccgttaccaccacgtcgggcgatggtctgaccacgtcaaagcaatgggacgac
acgggcgctggcacgttcggtctgtctcgaacaagtctgatcgtccttggagccgatggc
tcgcgggtgacgactgatcggatgctgacgaatggcgtcaccacgcgcatcgacgaacac
aaagtgtccgccgacggcctgacgatcacggagcgcgccgacctcaatggtgacggcacc
ttcgatcagacattgacggatgtgactgtcctgaatgccgatggcagcaagacgagatcc
gaaaccgccacgaaaccggacggttctacgatctcttcgcgggtgacgacagtctcaaag
gacggtctgaacacttcagtcgccgagacatccaatgtcgctggctgggttgcgcggaca
acctctatcgtgacttccctcctagctgacggtagttccaggaccgttaaatcggtcaag
aatgccggcggtcagcttatcgagagcgagactgtcgacaagactgcagatggccgcact
acggcgattttacgcgatcgcaacggcgatggtatcgttgaccatcgtgaagtggaaacc
cgctttgccgacggtcgcgtgtccctggttgagaccacgtacggatcgaccggtaacgtg
gtgtcctctgtcagttctataacgagcgccaacggcctgcggacagtcattgataccgac
aaaaatggcgacggtgtcctcgacctcaagaaaacgattgaccgccagacctttgctgat
ggcagtacaaaggtcgtgaccacggttgtcaacgccaccacgaatgcggtcaaatccagg
acggaagaaaccgtcagtgcggatggcacgttgcggcttgagagcaccgatgtgaatggc
gatgggaccgccgatcagacggttcgagaagagctccttccctccggcatccgcaagacc
accgtcaccaacaatgccgcggcaaaagcatcttccgagatccgggtcggtgagatctat
tggagcgacacgatcccgacgaagatcgagacgacggtgtcagtggacggcatgacgcgc
aatatccgcatggatattgacggaaatggcgtgtttgaggtcacggctacagccgtcaca
cagatcgatggcagcactgtcactacaattactgaaaccaacgccaatggcaccgtcaag
gcgaatggaacgctgacccagagccatgacgggcgtgtcagtgttttgagcgctgatact
caaaatgatggtgtgattgattccatcatcaccaccacttccatggtcgatggcgcggtg
gaaaaggtggcaatcaagaaaagtgccgccggggccgtcacagagaccaagacctcgaag
attgatgcgctgggcaatctgctctccagcgaaacgctcgatggatcaaaccgaaagatc
gaggcgtatgtctggcaagccgacctcaccgcgacgcgaacgcggtaccaggcgacaaat
ggtgcgatttcgtccttggagaccttcaccgctgaaggcaagataaaagctgccacgcat
ttcgatgcgcttggtgctcaagcctggactcgcatcgagcaggtgttcaacgcatcggag
caaaaactctccgagacgcaattcatggacgatggcacgaaatgggtcaccacctacgac
cttgcgaatgccaagacctggaaagagtacgttcagaactttgacaaggcaggccgccag
atcggggtctatcaggacaatgacaacgggacatcggtcagatacctgttcgaccctgcg
aacagccaagcttggtccagtgttgaaacgcgttatgacacagcggggaaggcgacgttc
gaagttatgaattacgacaacggtcgccgttcagacgctacattcgacgtcaacaatgcc
gcctcttggaagaatattgtgcgaacctatgattccagcaacaggctacttgaagaaagc
atcctgaatgacaacaacacccgtgacgtgaattatttcgatacggacaacacccaaggt
tattcaaagggaataaaattttacgagtccaatggggtattggcgcgggaagttatctac
gaaaacaatcccgtaaattactacaggcacacgtatgacgcgctgaacaatcaaacctgg
atcaagaagacgcagtactatcaggcgttaagcttagttcgcacggaaatctggtacgac
aacgggacctatacgagaaaaactgaagatcccaatcgccggcctatcgtcgttgatctg
gacggcgacgggcaggtttcgatcacggaaaatacatccgtgggcggggtccggtttgac
tgggacggtgacggctcagctgacacgaccgcctgggtaggtcccggtgacggattgctg
gtgatcgatctcgccgctgacggttcagccggatctgatggcagtatcgatcaggcgcgc
gaaatcgcgttttcgatgtggccggccgataccgacgaaaacccggtttctgacctggag
ggcctgcggatcgcgttcgataccaatggcgacaatgttctggattcccatgatacccgc
tggaacgagttccgcatctggcaggatctcaaccagaacggcgtcagcgacgctggcgaa
ctgcggagcatgtcggaagcgggcatcaagctcttcaatcttctgccgagcaccgaaggc
gcaattacgttcgccgatggttcggccatcaccggtaccagcacctacgagaccatggac
ggactgaagcatctggccgccgacgcgactttcgcattcactccgtcgaggcagggtgtc
acggcttga
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integrated database retrieval system