Rhizobium sp. SL42: IM739_10890
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Entry
IM739_10890 CDS
T11805
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhiu Rhizobium sp. SL42
Pathway
rhiu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhiu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM739_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhiu03021
]
IM739_10890
03400 DNA repair and recombination proteins [BR:
rhiu03400
]
IM739_10890
Enzymes [BR:
rhiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM739_10890
Transcription machinery [BR:
rhiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM739_10890
DNA repair and recombination proteins [BR:
rhiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM739_10890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
McdB_C
IDH
Motif
Other DBs
NCBI-ProteinID:
UJW73433
LinkDB
All DBs
Position
2296640..2297650
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLSMTIETDGSVTGEDAVAFAARILQDQLGVFVNFDEPQKEVEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaagaattggcaggaactgatcaagccgaacaaggtggagttcacctcgtct
ggccgcaccaaggcaacgctggttgcagaaccgctcgagcgtggcttcggcctgacgctc
ggcaacgctctgcgtcgcgttctcttgtcgtcgctgcgcggtgctgctgttacggctgtt
cagatcgacggcgttctgcatgagttctcttcgatcccgggcgtccgcgaagacgtgacc
gatatcgttttgaacatcaaggaaatcgccatcaagatggacggcgacgatgccaagcgc
atggtcgttcgcaagcagggtccgggcgtcgttaccgccggtgacattcagactgttggc
gacatcgagatcctgaacccgaaccacgtgatctgcacgctcgacgagggcgccgagatc
cgtatggagttcacggtcaacaacggcaagggttatgtcccggctgatcgtaaccgcgca
gaagatgcaccgatcggccttatcccggtcgacagcctctactcgccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactacgacaagctgtccatg
accatcgagaccgacggttcggttaccggtgaagacgcagtcgccttcgccgcccgtatc
cttcaggaccagctcggcgtcttcgtcaacttcgacgaaccgcagaaggaagtcgaagag
gaatcggttaccgaactggcattcaacccggctcttctcaagaaggtcgatgaactcgaa
ctgtctgtccgctcggcaaactgcctgaagaacgacaacatcgtgtacatcggcgatctg
atccagaagaccgaggctgaaatgctgcgcacgccgaactttggccgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggtatggaagtaccggcctgg
ccgccagagaacatcgaagatctcgcaaagcgttacgaagaccaatattaa
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