KEGG   Rhizobium sp. SL42: IM739_12300
Entry
IM739_12300       CDS       T11805                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rhiu  Rhizobium sp. SL42
Pathway
rhiu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IM739_12300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhiu02022]
    IM739_12300
Two-component system [BR:rhiu02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   IM739_12300
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA AAA_2 MCM FleQ AAA_25 ABC_tran
Other DBs
NCBI-ProteinID: UJW73678
LinkDB
Position
2606322..2607686
AA seq 454 aa
MASDILVVDDEEDIREIVSGILSDEGHETRTAHDADSALAAISDRAPRLIFLDIWMQGSR
LDGLSLLDEIKVRHPDLPVVMISGHGNIETAVSAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKREVSDLKRRTGDAVELIGTSVAVSQLRQTIEKVAPTNSRIMIFGASGCGKELVA
RMIHKRSSRAGGPFVSLNAAAITPDRMEMALFGTEGTPGQPRRIGALEEAHRGILYLDEI
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSSAYNLESMIAEGRFREDLFHRL
AVVPIKVPALAERREDIPFLVDMFMRQISEQAGIRQRKIGEDAMAVLQANDWPGNIRQLR
NNIERLMILARGDAPETAITAEMLPQDLSDMLPKVSASNDTHIMTLPLREAREMFERDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcctctgatattctggtagtcgatgacgaagaggacattcgcgagattgtctccggc
atcctgagcgacgagggccacgagacgcggacggcgcatgatgccgacagcgctcttgcg
gcgatttctgatcgtgccccgcgcctgattttcctcgatatctggatgcagggcagccgc
ctcgacggcctgtccctgcttgacgagatcaaggtgcgccatcccgatctgccggtggtg
atgatttccggtcacggcaatatcgaaacggccgtatcggcgatcaagcgcggtgcgttc
gatttcatcgaaaagccgttcaaggcggatcgcctgatcctgattgccgagcgtgccttg
gaaaactccaagctcaagcgcgaggtgtccgatctcaagcgccgcactggtgatgccgtc
gagctgatcggaacctcggtcgccgtctcgcagctgcgccagacgatcgagaaggtcgcg
ccgaccaatagccgcatcatgatttttggtgcctcaggctgcggcaaggaactggttgcc
cgcatgatccacaagcgctcgtcccgcgccggtggaccatttgtgtcgctgaatgcggcc
gctatcaccccggaccgcatggaaatggcgctgttcggcaccgaaggcacgccgggtcaa
ccgcgccgtatcggtgcgctggaagaagcccatcgcggcattctctacctcgacgaaatc
ggcgaaatgccgcgtgagacgcagaacaagatattgcgcgtccttgtcgatcagcagttc
gagcgcgtcggcggctccaagcgcgtcaaggtcgacgtccggatcatttcgtccagtgcc
tataatcttgagagcatgatcgccgaaggccggttccgcgaagacctgttccaccggctt
gccgtggtgccgattaaggtgccggcgctggccgagcgtcgggaggatattccgttcctc
gtcgacatgttcatgcgccagatctccgagcaggcgggtatccgccagcgaaagatcggc
gaggatgccatggccgtgcttcaggcgaacgattggcccggcaatatccggcagttgcgc
aacaacatcgagcgactgatgattctcgcccgtggtgacgcgccggagaccgcaattacc
gctgaaatgttgccgcaggatctgtccgacatgctgccgaaggtatcggccagcaatgac
acccatatcatgaccctgcctttgcgcgaggcgcgcgaaatgttcgaacgcgactatctg
attgcccagatcaatcgcttcggtggaaacatttcacggaccgcggaattcgtcggcatg
gagcgctctgcactccatcgcaaactgaaatcccttggcgtataa

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