KEGG   Rhizobium sp. SL42: IM739_12870
Entry
IM739_12870       CDS       T11805                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
rhiu  Rhizobium sp. SL42
Pathway
rhiu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rhiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    IM739_12870 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhiu03400]
    IM739_12870 (uvrB)
DNA repair and recombination proteins [BR:rhiu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IM739_12870 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      IM739_12870 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 AAA_16 Kinesin SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: UJW73784
LinkDB
Position
2724005..2727088
AA seq 1027 aa
MAKTPKSSAPSKPGFEEAPQTAFEGEPLSGSVSDWVRQLEAEAEAAGVESQRELASKAGK
HRKKIEIEARKHAEKVALDKAQKSTTAKNTTATTTSRGVSVGASSDPKTRAAAGLNPVAG
MDVSLEEAESLAPGAVTATVEALSSLIESGNPLFKDGKIWTPHRPARPDKSEGGIAIRMV
SDYEPAGDQPTAIADLVEGIQSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKT
LAAQLYSEFKHFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHAATR
AILERDDCIIVASVSCIYGIGSVETYTAMTFQMSVGDRIDQRQLLADLVAQQYKRQEINF
IRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKTGEMKSVKIYANSH
YVTPRPALNGAIKSIKEELKARLAELEKAGRLLEAQRLEQRTRYDVEMLEATGSCAGIEN
YSRYLTGRQPGEPPPTLFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYGFRL
PSCMDNRPLRFEEWDAMRPPTVAVSATPGNWEMEQSGGVFAEQVIRPTGLIDPPVEVRSA
KTQVDDVLGEIKETALKGYRTLVTVLTKRMAEDLTEYLHEHGVRVRYMHSDIDTLERIEI
LRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDG
KVILYADQITGSMQRAMDETSRRREKQMAYNLEHGITPESVKAKISDILDSVYERDHVRP
DISGAVGGKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAEL
AAMDDPMARQEAKNAEGARGNGKGSAPSSPSPSAASPASSSGLTRGPTDNAGDSQPRIST
SGRNKSGSPEGKGSYFAKPTLDDMGPGTDTATPLFRKNTLDEMTVGRTEKPMPGKIPQKP
AAPPSPREGEGARRADEGAIPPMVRGPTTPTDPRPIIRAKSGAGSYEDAGDVKRQKRTKG
KTGRPGR
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggccaagacacccaaatcctccgccccttcgaagcccggtttcgaggaagctccgcaa
accgcgtttgaaggcgagcccctctcgggctccgtctccgattgggtgagacagctcgag
gccgaagccgaggcggccggcgtcgagagccagcgcgaactcgcctccaaggccggcaag
catcgcaagaaaatcgagatcgaggcgcgcaagcacgccgagaaggtggcgctggacaag
gcgcagaaatcaaccaccgcgaaaaacaccaccgcgaccaccacgtcgcgcggcgtgtcc
gtcggcgcctcctccgatccgaagacccgggcggctgccggcctcaatccggtcgccggc
atggatgtctcgctggaagaagccgaaagcctcgcccccggcgccgtcaccgccaccgtc
gaggctttgtcctcgttgatcgagagcggcaatccgctgttcaaggacggcaagatctgg
acgccgcaccgcccggcccggccggacaagtcggaaggcggcatcgccatccgcatggtc
tccgactatgaacccgccggcgaccagccgaccgcgatcgccgacctcgtcgagggcatc
cagtccggcgagcgctcgcaggtcctgctcggcgtcaccggctccggcaagaccttcacc
atggccaaggtgatcgaggccacccagcgcccggccgtcattctcgcgccgaacaagacg
ctggcggcccagctctattcggagttcaagcacttctttcccgacaacgcggtcgaatat
ttcgtctcctattacgactactaccagccggaagcctatgtgccgcgttccgacaccttc
atcgagaaggaatcgtcgatcaacgaacagatcgaccgcatgcgccatgccgccacccgc
gccatcctcgagcgcgacgactgcatcatcgtcgcctccgtctcctgcatctatggtatc
ggctcggtcgagacctacaccgccatgaccttccagatgtcggtcggcgaccgcatcgac
cagcgccagctgctcgccgacctcgtcgcccagcaatacaagcgccaggagatcaatttc
atccgcggctcctttcgggtgcgcggcgacacgatcgaaatcttcccggcccaccttgag
gatgccgcctggcgcatctcgatgttcggcgacgagatcgacgcgatcaccgaattcgac
ccgctgaccggtcaaaagaccggcgagatgaagtcggtgaagatctatgccaacagccac
tatgtcacgccgcgcccggccctgaacggcgcgatcaagtcgatcaaggaagaactcaag
gcgcgccttgccgaactggaaaaggccggccgcctcctcgaagcccagcgcctcgaacag
cgcacccgctacgatgtcgaaatgctcgaagccaccggttcctgcgccggcatcgagaac
tattcgcgttatctcaccggccgccagcccggcgagccgccgccgaccctgttcgaatat
atccccgacaatgcgctgttgttcatcgacgaaagccatgtctcggtgtctcagatcggc
ggcatgtatcgcggcgacttcaggcgcaaggcgacgctggccgaatacggcttccgcctg
ccctcctgcatggacaaccggccgctgcgtttcgaggaatgggacgccatgcgcccgccg
acggtcgccgtctcggccacgcccggcaattgggaaatggaacagtccggcggcgtcttt
gccgaacaggtcatccgcccgaccggcctgatcgacccgccggtcgaggtccgctcggcc
aagacccaggtcgacgacgtgctcggcgagatcaaggaaaccgcgctgaagggttatcgc
accctggtcaccgtcctgaccaagcgcatggccgaggacctgaccgaatacctgcatgaa
catggcgtgcgcgtccgctacatgcattccgacatcgacacgctggagcgcatcgagatc
ctgcgcgatcttcgtctcggtgctttcgacgttctggtcggcatcaacctgttgcgcgaa
ggcctcgacattcccgaatgcggcttcgtcgccatcctcgacgccgacaaggaaggtttc
ttgcgctcggaaacctcgctcattcagaccatcggccgcgcggcgcgtaacgtcgacggc
aaggtcatcctctatgccgaccagatcaccggctcgatgcagcgggcgatggacgagacc
agccgccgccgcgaaaagcagatggcctacaatctcgaacacggcatcacgccggaatcg
gtcaaggcaaagatctccgacatcctcgattccgtctacgagcgcgaccatgtccgcccc
gacatttccggcgccgtgggcggcaagggctttgccgatggcggccacctcgtcggcaac
aacctccaggcccatctcaacgcgctcgaaaaatccatgcgcgacgccgccgccgacctc
gacttcgaaaaggccgcccgcctgcgcgacgaaatcaaacgcctcaaggccgccgaactc
gccgccatggacgacccgatggccagacaagaggcgaaaaatgcggaaggcgcgagaggc
aatggaaaaggatccgcacccagctctccgtctccatccgcagcctctccggcgtcatcc
tcgggcttgacccgaggacccaccgacaacgcaggcgacagccaaccccgcatctcgacg
tcaggccgcaacaaatccggctcaccggagggcaagggcagctacttcgccaaacccacc
cttgacgacatgggcccgggcaccgatacggcgacgccgctgttccgcaagaacaccctc
gacgaaatgaccgtcggccgtaccgaaaaaccgatgcccggcaagatcccgcaaaagccg
gcggctcccccttctccccgtgagggagaaggtgcccgaagggcggatgagggggccatc
ccccctatggtgagggggccaaccaccccaaccgacccccgcccgatcatccgcgccaaa
tccggcgccggttcctacgaggacgccggcgacgtcaagcgacagaaacgcaccaagggc
aagaccgggagacccggccgctga

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