Rhizobium sp. WYJ-E13: KQ933_00110
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Entry
KQ933_00110 CDS
T11043
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhiw03016
]
KQ933_00110 (miaB)
Enzymes [BR:
rhiw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KQ933_00110 (miaB)
Transfer RNA biogenesis [BR:
rhiw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KQ933_00110 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QWW68148
LinkDB
All DBs
Position
complement(20764..22173)
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AA seq
469 aa
AA seq
DB search
MTQDSALLQAPETSLRDGSNSRKVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDMEEAD
LVLLNTCHIREKAAEKVYSALGRLREMKKRKAADGHEMMIGVTGCVAQAEGEEILRRAPA
VDVVIGPQTYHRLPEALRRAKEGHRVVDTEYAIEDKFEHLPIAEAPKIRARGVTSFLTVQ
EGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAMRLVDGGVREITLLGQNVNAWHGLGPKGE
EWSLGDLLYRLADIPGLARLRYTTSHPRDMDDRLIEAHRDLRTLMPYLHLPVQAGSDRIL
KAMNRRHTAAEYLSLIERIRKARPDIALSGDFITGFPGETDAEFEDTLKLVEEVRYAQAF
SFKYSTRPGTPGAELKDQVPEDIKAERLERLQALLLRQTQEFNESCIGKEIDLLLEKPGR
MPGQLIGRSPWLQSVNVDAKASQIGDIIKVRITGTGTNSLFAERAEAEV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggacagcgcccttcttcaggccccggagacttctcttcgcgatggctccaac
agccgcaaagttttcatcaaaacctatggctgccagatgaacgtctatgactcgacgcgc
atgagcgatgctcttgcgcgcgacggctatgagccgaccgaggacatggaagaggcagac
ctcgtcctgctcaacacctgtcatatccgcgagaaggccgccgagaaggtctattccgcg
ctcgggcgcctgcgcgagatgaagaaacgcaaggctgccgacggccacgagatgatgatc
ggtgtcactggttgcgtcgctcaggctgaaggcgaagaaatcctgcgtcgcgcaccggct
gtcgatgtcgttatcggcccgcagacatatcaccgcctgcccgaagcgctgcgccgcgcc
aaggaaggccaccgcgtcgtagatacggaatatgcgatcgaggacaagttcgagcacctg
ccgattgccgaggcgccgaagatccgtgcccgcggcgtgacttccttcctgaccgtgcag
gaaggctgcgacaaattctgcaccttctgcgtcgtgccctatacgcgcggttccgaggtc
tcgcgaccggtctctcagatcgtcgaagaggcaatgcggctcgtcgatggcggcgtgcgc
gaaatcacccttctcggacagaacgtcaatgcctggcatggcctcggcccgaagggcgag
gagtggagccttggcgacctgctctaccggcttgccgatatccccggccttgcgcggctt
cgctacacgaccagccatccacgcgacatggacgaccggctgatcgaggcgcatcgcgac
cttcgcacgctgatgccttatctacacctgccggtccaggcgggttctgaccgtattctc
aaagccatgaaccgccggcacacggcagcagaatacctctccctcatcgagcgcatccgc
aaggcgcgtcccgacatagccctctccggcgacttcattaccggctttccgggggagaca
gatgcggaatttgaggatacactaaagctcgttgaggaggtgcgttacgcgcaagccttc
tcgttcaaatattcgacgcggccgggtacccccggtgcggaattgaaggaccaggtgccg
gaagatatcaaggcagaacggctggaacgcctgcaggcgctgcttctcaggcagacgcag
gaattcaacgagtcctgcatcggcaaggaaatcgatcttctcctcgaaaagccgggccgt
atgcctggacagctcatcggacgctcaccgtggctgcagtccgtgaatgttgatgcaaaa
gcatcgcaaatcggtgacattattaaagtgcgaatcacaggaaccggaaccaacagcctg
tttgccgaacgcgcagaggctgaggtctaa
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