Rhizobium sp. WYJ-E13: KQ933_02410
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Entry
KQ933_02410 CDS
T11043
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhiw03009
]
KQ933_02410
Enzymes [BR:
rhiw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KQ933_02410
Ribosome biogenesis [BR:
rhiw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KQ933_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QWW68584
LinkDB
All DBs
Position
complement(499971..501221)
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AA seq
416 aa
AA seq
DB search
MSTETITIDRLGAQGDGIANGKDGPVYVPFTLPGETVAIARVKNQGTVMSIASASTDRQE
PPCRHFGPDGVNGTCGGCTLQHMADVPYRAFKRQLVIDALRSKGLTPEVGEIVAAHPGER
RRVVFAARKTEKDMLIGFNQAESHHIVAIEECPISSAGIVSRLPAIKAVGAAVATNAEAF
RIAVLETLSGLDLAVEGVKKLSDQQRRRAIEVVLGLRGIARVSLDGEILVEPVKPIIEFG
GVQVSPPAGGFTQATKPAEEAMANLVLAHVGKAKRIADLFAGAGTFSLQLARMGRVHAVE
GDAKAVAALDHAARNTQGLKPVSVEKRDLFRRPLMTSELKVFDAVVFDPPRAGAEFQCKE
LARSIVKKVVAVSCNPLTLARDLVILVEGGYRITSVTPIDQFLWTSHVEIVATLEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggaaacaatcaccatcgacaggctcggtgcacagggcgacggcattgccaat
ggcaaggatgggccagtctatgtgcccttcacgctgcccggtgagacggtcgcgatcgcc
cgcgtcaagaaccagggcaccgtgatgtcgatcgcctcggcttccactgaccgacaggag
ccgccctgccggcatttcggtcccgatggcgtcaacggcacctgcggcggctgcaccctg
cagcacatggcggatgttccctaccgcgccttcaagcggcagctcgtcatcgatgcgctg
aggtccaaaggactgacgcccgaggtcggcgagatcgtggccgcccatccgggtgagcgg
cggcgggtggtctttgcggcgcgcaagaccgagaaggacatgctcatcggtttcaaccaa
gccgaaagccaccacatcgtcgccattgaggaatgtcccatctcgtcggcggggatcgtt
tcccggctgccggcgatcaaggctgtcggtgctgccgtggcgaccaatgccgaggccttc
cgcatcgcggttctggaaacgctctctggtctcgatcttgctgtcgaaggcgtgaagaag
ctttccgaccagcagcggcgcagggcgatcgaggtcgtgcttggccttcgcggcattgcg
cgcgtttcgctcgacggcgaaatcctcgtcgagccggtgaagccgatcatcgagttcggc
ggcgtgcaggtttccccgcccgccggcggtttcacgcaggcgacgaagccggccgaagag
gcgatggcaaacctcgtgcttgcccatgtcggcaaggccaagcggatcgccgatctcttc
gccggcgccggcacgttttcactgcagctggcccgcatgggccgcgtgcatgccgtcgaa
ggcgatgccaaggctgtcgcggcgctcgaccacgcagcgcgcaatacgcagggcctgaaa
cccgtgagcgtcgagaagcgcgatctgttccgccgcccgctgatgacctcggagctcaaa
gtcttcgacgccgtcgtcttcgatccgccacgtgcgggcgcggagttccagtgcaaggag
ctggcacgctcgatcgtcaagaaggttgtcgccgtcagctgcaatccgctgacgcttgcc
cgcgatctcgttatcctcgtcgagggcggctaccggattacctcggtgacgcccatcgac
cagttcctctggacctcgcatgtcgagatcgtggccacgctggagaaatga
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