KEGG   Rhizobium sp. WYJ-E13: KQ933_05805
Entry
KQ933_05805       CDS       T11043                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rhiw  Rhizobium sp. WYJ-E13
Pathway
rhiw00230  Purine metabolism
rhiw00240  Pyrimidine metabolism
rhiw01100  Metabolic pathways
rhiw01232  Nucleotide metabolism
Module
rhiw_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rhiw_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rhiw00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    KQ933_05805
   00240 Pyrimidine metabolism
    KQ933_05805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhiw03400]
    KQ933_05805
Enzymes [BR:rhiw01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     KQ933_05805
DNA repair and recombination proteins [BR:rhiw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    KQ933_05805
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN GrpE
Other DBs
NCBI-ProteinID: QWW69219
LinkDB
Position
complement(1153503..1157315)
AA seq 1270 aa
MRIERRFTKAGQGAYADIEFRKATSEIKNPDGSIVFRLENIDVPAQFSQVATDVLAQKYF
RKAGVPARLKKVEENDVPSFLWRSVADDAALKGLPKDEQTGSETDARQVFDRLAGTWTYW
GWKGGYFSSEEDAAAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKITKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSMLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKVVAQHLKAIMKACVNCEGDNGDCFDPAKNPALKREIRAAKKDQVPENY
VQRVIQFARQGYKDMEFKTYDTDWDSEAYLTVSGQNSNNSVSIKDNFLRAVEEDGDWNLT
ARKDGRVMKTLKARDLWETISYAAWASADPGIHFNTTMNDWHTSPAGGPIRGSNPCSEYM
FLDDTACNLASLNLLQFKDKATKRINIGDYEHAVRLWTVVLEVSVMMAQFPSKRIAELSY
EYRTLGLGYANIGGLLMSTGIPYDSAEGRAIAGSLTAIMTGICYATSAEMAAELGPFPNY
EPNREHMLRVIRNHRRAAHGENAGYEALSVNPVALIHQENPDQDLAAHAMAAWDKALELG
EKHGYRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDALR
TLGYPESQIAEIEAYAVGHGNLNQAPAINPSTLKAKGFTDEKVEAVNAALKSAFDIKFVF
NQWTLGADFLKTTLKVSDEQLTDMSFSLLDHIGFSKKDIEAANIHVCGAMTLEGAPFLKK
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
MSWKLGLKANALYRDGSKLSQPLNASLIEDESDEDALEDLIQQPLAAQAVTVTEKIIEKV
IERVSREREKLPNRRQGYTQKAAVGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGIVIGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLVSTGWTRGYKPTLVSNTGSDRQLGEPKGAATA
APARASSTGSVTSFAGAAARKLEPTVAISTSEIVAFKRDYEERAKELAEEIAEEVLEEAG
ADATALFSDKAAADAATAKTEAKKVEAERRARSIMQGYTGNMCSECQNFTMVRNGTCEKC
DTCGATSGCS
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgtcggtttacgaaggctggtcaaggcgcctatgcggatatcgaattc
cgcaaggcgacgagcgagatcaagaaccctgacggctctatcgtcttccgcctcgaaaac
atcgacgttcccgcgcagttctcccaggtcgcgacagacgttctggcgcagaaatatttc
cgcaaggccggcgtcccggcccgcctgaagaaggtcgaagagaacgatgtcccctctttc
ctgtggcgctctgtagccgacgacgcggcgctgaagggcctgccgaaggacgaacagacc
ggctcggaaaccgacgcgcgccaggtcttcgatcgtctcgccggcacctggacctattgg
ggctggaaggggggctacttctcttcggaggaagatgcagctgccttcaaggacgagctt
gcctatatgctcgccacgcagcgcgtcgccccgaactccccgcagtggttcaataccggc
ctgcactgggcctatggaatcgacggccccggccagggccacttctatgtggatcccttc
accggcaagatcaccaaatccaaatcggcctacgaacatccgcagccgcatgcctgcttc
atccagtccgtcgaagacgacctcgtcaacgaaggcggcatcatggacctctgggtgcgt
gaagcccgtctcttcaagtacggttccggcacgggttccaacttctccatgctgcgcggc
gaaggcgaaaagctttccggcggcggccgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgctgccggcgccatcaagtctggtggtacgacccggcgtgcggccaagatg
gtcgtcgtcgatatcgaccatcctgatatcgaggaatatatcaactggaaggtcaaggaa
gagcagaaggttgccgctctcgtgaccggctccaaggtcgtcgcccagcatctgaaggcg
atcatgaaggcctgcgtcaattgcgaaggcgacaatggtgattgcttcgacccggccaag
aacccggccctgaagcgcgaaatccgcgctgccaagaaagatcaggttccggaaaactat
gtccagcgcgtcatccagttcgcccgccagggctacaaggacatggagttcaagacctac
gacacggactgggattcggaagcctatctcaccgtctccggccagaattccaacaactcc
gtctcgatcaaggacaacttcctgcgcgctgtcgaagaagatggcgactggaacctgacc
gcccgcaaggacggccgggtgatgaagacgctgaaggcccgcgatctctgggaaacgatt
tcctatgccgcctgggcatcggccgatccgggcatccatttcaacaccacgatgaacgac
tggcacacctcgccggccggcggcccgatccgcggctctaacccgtgctcggaatatatg
ttcctcgacgacacggcctgcaacctcgcttcgctgaacctcctgcagttcaaggacaag
gccaccaagcgcatcaatatcggcgactacgaacatgccgttcgcctgtggaccgtcgtg
ctcgaagtctcggtcatgatggcgcagttcccgtccaagcgcatcgccgaactttcctac
gaataccgcacgctcggcctcggctacgccaatatcggcggcctgctgatgtcgactggc
atcccttatgacagcgcggaaggccgcgccattgccggctcgctgacggcgatcatgaca
ggcatctgctacgcaacctcggccgaaatggctgccgaactcggcccgttcccgaactac
gagccgaaccgcgagcacatgctgcgcgtcatccgcaaccatcgccgcgccgcccatggc
gagaatgctggctacgaggctctctcggtcaacccggttgcgctgatccatcaagaaaac
cccgaccaggatctggcagcccatgcaatggctgcctgggacaaggcgctcgaactcggc
gaaaagcatggctaccgcaatgcgcaggtctcagtcatcgccccgaccggcacgatcggc
ctcgtcatggattgcgacacgaccggcatcgaacctgacttcgcgctcgtaaagttcaag
aagctcgccggcggcggctatttcaagatcatcaaccgcgccgttccggatgcgctgcgc
acgctcggttatcccgaaagccagatcgccgagatcgaagcttacgctgtcggccacggc
aacctcaaccaggctccggccatcaacccctcgacgctgaaggccaagggcttcaccgac
gagaaggtggaagccgtcaatgcggctctgaagagcgccttcgacatcaagtttgtcttc
aaccagtggacgctcggcgccgacttcctgaagaccaccctgaaggtctccgacgaacag
ctcaccgacatgagcttcagcctgctcgaccatatcggcttctccaagaaggacatcgag
gccgccaacatccacgtctgcggtgcgatgacgctggaaggtgcgcctttcctcaagaag
gaacacctgccggtcttcgattgcgccaatccgtgcggcaagatcggcaaacgttacctc
tcggtcgaaagccatattcgcatgatggcggctgcccagcccttcatctcgggtgcgatc
tcgaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaatgcctatatg
atgtcctggaagctcggcctgaaggcaaacgccctctaccgtgatggctccaagctttcg
cagccgctcaacgcttcgctgatcgaggacgagagcgacgaagatgcgctggaagatctg
atccagcagccgctcgcagcccaggccgtgacggtcaccgaaaagatcatcgagaaggtc
atcgagcgtgtttcccgcgaacgcgagaagttgccgaaccgtcgccagggctacacccaa
aaggctgccgtcggcggtcacaaggtttatctccgtaccggcgaattcggcgacggccgt
ctcggcgagatcttcatcgatatgcacaaggaaggtgctgccttccgtgcaatgatgaac
aacttcgccatcgccatctcgctcggcctgcaatatggcgtgccgctcgaagaatatgtg
gaggccttcaccttcaccaagtttgagccggccggcatcgtcatcggcaatgacgcgatc
aagaacgcaacatcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgtcacgacctcgcccatgtcgatacgtccgacttctccaacacggcgctcggcaagggc
atccaggaaggcaagacgaacctcgtctcgaccggctggacccgcggctacaagccgacg
ctggtctcgaacaccggcagcgaccgtcagcttggcgaacccaagggtgcggcaacggca
gcccctgcccgcgcctcctcgaccggctcggtgacctcctttgcgggtgcagcagcccgt
aagctggagccgacagtcgccatctccacctccgaaatcgtcgccttcaagcgcgattac
gaagagcgcgccaaggaactggctgaagagatcgccgaggaagtgctcgaagaagccggc
gcagacgcaaccgcccttttctccgacaaggccgcagccgacgctgcaaccgccaagacg
gaagccaagaaggtggaggctgaacgccgcgcccgctcgatcatgcagggctatacgggt
aacatgtgcagcgagtgccagaacttcacgatggtgcgcaatgggacttgtgagaagtgc
gacacttgcggtgcaacgagtgggtgcagctga

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