Rhizobium sp. WYJ-E13: KQ933_05960
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Entry
KQ933_05960 CDS
T11043
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_05960
Enzymes [BR:
rhiw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KQ933_05960
DNA repair and recombination proteins [BR:
rhiw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KQ933_05960
Prokaryotic type
KQ933_05960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QWW69249
LinkDB
All DBs
Position
complement(1184631..1186085)
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AA seq
484 aa
AA seq
DB search
MARETAARPVIVWFRKDLRLDDNKALHAACTSGRPVIPLYIREPDEEGTGPLGSAQAWWL
HHSLHALDAALRKHDGKLILVSGHARDALADIITRSGAKAVFWNRRYDPPGIAIDMRLKH
ELEKQAIEARSFSGQLLHEPTKVKSSTGTSYRVYTPFWRALEGEGEPESPIDAPERYRFP
EQFPASETLVSWKLLPHGPNWAKSFPDMWTPGEAAAQERLQDFIEGGLRGYSADREFPGK
TTTSLLSPHLALGEISPARIWEATKGLSRKISSDDIVRFRKELVWREFSYHLLFHFPELA
RDNWNDSFNGFGWRQDDDGFHAWCNGQTGYPIVDAGMRQLWRHGWMHNRVRMITASFLIK
DLLVDWRRGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVFQGEKFDADGS
YIRQFVPELEKLDDTYIHRPFEAPENVLDKAGITLGETYPRPIVDHATARRRALKVYNAM
KDAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgggagactgctgcaagaccggtgatcgtctggtttcgcaaggatctgcgcctt
gacgacaacaaggctctgcatgcggcatgcacatcggggcgaccggtcattccgctctat
atccgcgaacccgacgaagagggcacggggccgcttggctccgctcaggcctggtggctg
caccattcgttgcatgctctcgatgcagccctgagaaagcatgacggcaaacttattctg
gtaagtggccatgcccgtgatgcactggcggacatcataacgcgaagtggtgcgaaagcg
gtgttctggaaccgccgctacgatccgccaggcatcgcgatcgatatgcgcctcaaacac
gaactggaaaaacaggcgatcgaagcacgcagcttcagtggccaactcctgcatgagccg
accaaggtcaagtcctcgactggcacatcgtatcgtgtctacacgcctttctggcgggcg
ctcgaaggcgaaggagagccggaatcaccgatcgatgccccggaacgatatcgtttcccc
gagcagtttccggcctccgaaacgctcgtctcatggaagctcctgccgcacggaccgaac
tgggcaaaatcctttcccgatatgtggacaccgggcgaagcagccgcgcaggaaaggctg
caggatttcatcgaaggcggccttcgtggctattcggccgatcgcgaatttcccggaaag
acgacaacatccctgctctctccgcatctggcgctgggagaaatctcgccggcgcgcatc
tgggaggccacgaaaggactttcgcgcaagatttcctccgatgacatcgtgcgctttcgc
aaggaattggtatggcgggaattctcctaccatctgctcttccattttccggagctggca
agagataattggaacgacagtttcaacggcttcggctggcgccaggatgacgatggcttt
cacgcctggtgcaatggccaaacaggctatcccatcgtcgatgccggcatgcgccagctc
tggcgccatggctggatgcacaaccgcgttcggatgatcaccgcctcgtttctcatcaag
gatctgcttgtcgactggcgccgcggggaggcctggttccgcgacacgcttgtcgatgcc
gacccggccaataatgcggcgagttggcagtgggtggcaggatcgggtgcagatgcctct
cccttcttccgcatcttcaatccggtgtttcagggcgagaagttcgatgcggatggcagc
tacatccggcagttcgtgccggaactcgaaaagctcgacgacacatatatccaccggcca
ttcgaagcccctgaaaacgtgcttgataaagccggtatcacgcttggcgaaacctatccc
agacccatcgtcgatcacgccacggcgcgccgtcgggctttaaaggtctataacgccatg
aaggatgcagcatga
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