Rhizobium sp. WYJ-E13: KQ933_07575
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Entry
KQ933_07575 CDS
T11043
Name
(GenBank) SPOR domain-containing protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00550
Peptidoglycan biosynthesis
rhiw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQ933_07575
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhiw01002
]
KQ933_07575
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhiw01011
]
KQ933_07575
Enzymes [BR:
rhiw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KQ933_07575
Peptidases and inhibitors [BR:
rhiw01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
KQ933_07575
Peptidoglycan biosynthesis and degradation proteins [BR:
rhiw01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KQ933_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Beta-lactamase
Peptidase_S13
Nucleo_P87
Motif
Other DBs
NCBI-ProteinID:
QWW69555
LinkDB
All DBs
Position
1510566..1512137
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AA seq
523 aa
AA seq
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MQAKSRIVSRSISSVSSPRSAGFLAKVLTILSMAIAIVAVDSVNAEAEAANPKYAGIVVD
ARTGNVLYSENADRLQYPASLTKMMTLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLG
VRAGGTITVEQGILGLVTLSANDAATALGEMLGGSEDRFAQMMTAKAHALGMTRTTYRNA
NGLPNTAQMTTARDQARLGIALRQHFPQYYGYFSTRAFKFGNRVIRSHNRLVGSVRGVDG
IKTGYTRAAGFNLVSSLQVDGRSIVGVVLGGASTPARDAQMRKLLATYMPKASTSGGTLV
AQSKPMPEMIETPAPVSPAKVAQVAEKKTIAANQLPVAADLGLPHKGPLPDARYQAASTE
VAYAETSTRKTDNPLVTQQMPSPTKVKTVAIKQQEQASVAVPTPAPAYMPPEQGDTSVDE
LTTASTKPAPAKEIATREVPQPSGWVVQIGVSASRESAMDLLRSAKAKGGKALSSAKPFA
IAYANDGDQVFRARFGGFDGQRDAVNACKALKKAGVKCWAAAQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaagagtcgaatagtgtcaaggtcaatttcctccgtatcatcgccgcggtct
gccggtttcctcgcaaaggtgctgacgatcctttcgatggcgatcgcgatcgtcgcggtc
gactcggtcaatgccgaagcggaagctgcaaatccgaaatatgccggcatcgttgtcgat
gcccggaccgggaatgttctctacagtgagaatgccgaccgtctgcaatatccggcgtcg
ctcacgaagatgatgacgctctacatgactttcgaggccctcgagcagggccgcattcgc
cttgatacgcctgtccccttctccgctcacgccgcagcccaggcgccgaccaagctcggc
gttcgcgccggcggcacgataacagtcgaacagggcatcctcggcctcgtgacgctttcg
gcgaatgatgcggcgacggcgcttggcgaaatgctcggcggttcggaagatcgcttcgcc
cagatgatgaccgccaaagcgcatgcgctcggcatgacgcgcaccacctatcgcaacgcc
aacggcctgccgaacaccgcgcagatgacgacggcccgcgaccaagcccgcctcggtatc
gcccttcgccagcatttcccgcaatattatggttatttcagtacgcgcgccttcaagttc
ggcaatcgcgtgatccgcagccataaccgcctcgtcggttccgtccgcggtgtcgatggc
atcaagaccggttacacccgcgctgccggcttcaatctggtcagttcgctgcaggtcgat
ggcaggtcgattgtcggtgtggttcttggcggggcgtccacccctgcccgcgacgcgcag
atgcgcaagctgctcgcaacctatatgccgaaggcttccaccagcggcggcacgctcgtc
gcccagtcgaagccgatgcccgagatgatcgaaacgcctgctccggtttctcctgccaag
gttgctcaggtcgcggaaaagaaaacgatcgccgccaatcagctgccagtcgcagccgat
cttggtctgccgcacaagggtccgcttccggacgcacgttatcaggcggcaagcacagag
gtcgcctacgcagagacatcgacacgcaagaccgacaatccgctggtaacgcagcagatg
ccgtctccgaccaaggtcaagaccgtcgcgatcaagcagcaggaacaggcttccgtcgcc
gtgccgacacctgcgcccgcctatatgccgccggaacagggtgatacgtcagtcgatgaa
ctgacgacagcctctacaaagcctgctcctgccaaagagattgccaccagggaagtgccg
cagccatcgggctgggttgtccagatcggcgtttccgcgagccgtgaatcggcgatggat
cttctgcggagcgcaaaggccaagggcggcaaggcgctgagttccgcaaagccgttcgct
atcgcctatgccaatgatggcgatcaggtctttcgcgcccgcttcggcggattcgacggc
cagcgtgatgcggtcaacgcctgcaaggctctcaagaaggccggcgtcaagtgctgggcg
gcggctcaatga
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