Rhizobium sp. WYJ-E13: KQ933_07735
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Entry
KQ933_07735 CDS
T11043
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00260
Glycine, serine and threonine metabolism
rhiw00630
Glyoxylate and dicarboxylate metabolism
rhiw00670
One carbon pool by folate
rhiw00785
Lipoic acid metabolism
rhiw01100
Metabolic pathways
rhiw01110
Biosynthesis of secondary metabolites
rhiw01200
Carbon metabolism
Module
rhiw_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KQ933_07735 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KQ933_07735 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KQ933_07735 (gcvP)
00670 One carbon pool by folate
KQ933_07735 (gcvP)
Enzymes [BR:
rhiw01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KQ933_07735 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QWW69585
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Position
1538613..1541477
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AA seq
954 aa
AA seq
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MTTPTEFQFTDYQPYDFANRRHIGPSPSEMSDMLGVIGYKSLDALIDATVPPAIRQRAPL
LWGAPMTEREALDKLRETANKNKVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMICDLTGLDVANASLLDEATAAAEAMAMAERVAKSKAKSFFVDA
DCHPQTIALIRTRAEPLGWSVIVGNPFTDLDPVDVFGAIFQYPGTHGHVHDYTGLISRLH
QTGAIAVVAADILSLTLLKSPGEMGADIAIGSSQRFGVPVGYGGPHAAYMSVKDVIKRSM
PGRLVGVSVDSRGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPKGI
KAIAQQVHQKAVLMAKGLEKLGYKVEPDTFFDTITVDVGHMQGLILRAAVAEGVNLRKVG
ETKIGMSLDERTRPATLEAVWRAFGGNFQIADFEPSYRLPKDLLRTSEYLTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPDDQALG
YREMIDDLTEKLCAVTGYDAFSMQPNSGAQGEYAGLLTIRNYHMADGQGHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVRENGDIDLDDFRAKAEEHAANLSCCMITYPSTHGVFEETV
KEICDLVHQHGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPHLPGHPETDGRSGAVSAAAFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYIAARLKGAYDVLYKSAAGRVAHECIIDTRPLVDSAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCEAMLAIRQEARDIEEGRSDKLNNPLKNAPHTVEDLVG
EWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPPVEAYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcctaccgaattccagttcaccgactatcagccctatgacttcgccaatcgc
cgtcatatcggcccctcgccgtctgaaatgtcggatatgctcggcgtgatcggctacaag
agcctggatgcgctgatcgacgcgaccgtgccgcctgccatccgccagagggcgccgctc
ctctggggcgcaccgatgacggagcgcgaagcgctcgacaagctgcgcgaaaccgccaac
aagaacaaggttctgacctcgctgatcggccagggctattacggcacgatcaccccgcct
gtcatccagcgcaacatcctggaaaacccggcctggtatacggcctatacgccctaccag
ccggaaatttcgcagggccgcctcgaagcgctgctgaattatcagacgatgatctgcgac
ctcaccggcctcgatgtcgccaacgcctcgctgctcgatgaggcgacggctgctgccgaa
gccatggccatggcagaacgcgtcgccaagtcgaaggccaagtccttcttcgtcgatgcc
gattgccacccgcagacgatcgcgctgatccgcacccgcgccgaaccgctcggctggagc
gtcatcgtcggcaatcccttcaccgatctcgatccggtcgatgtcttcggcgcgatcttc
cagtatccgggcacgcacggccatgtgcatgactataccggcctgatttcccgcctgcac
cagacgggcgccatcgccgtcgtcgccgctgatatcctctccctcacgctgctgaagtcg
ccgggtgaaatgggtgccgatatcgccatcggttcctcgcagcgtttcggcgttccggtt
ggttatggcggtccgcacgcggcctacatgtcggtcaaggacgtcatcaagcgctccatg
cccggccgtctcgtcggtgtttccgtcgattcccgcggcaaccgcgcctaccgcctgtcg
ctgcagacgcgcgaacagcacattcgtcgcgaaaaggcgacgtcgaacatctgcaccgcg
caggtcctgctcgccgtcatggcctccatgtacgccgtcttccacggcccgaagggcatc
aaggcgattgcccagcaggtccaccagaaggccgtgctcatggccaagggcctggaaaag
ctcggctacaaggtcgagccggacacctttttcgacacgatcaccgtcgatgtcggccat
atgcagggcctcatcctgcgcgcagccgttgccgaaggtgtgaacctgcgcaaggtcggc
gagacgaagatcggcatgtcgctcgacgagcgcacccgtccggcaacgctggaagccgta
tggcgcgccttcggcggcaatttccagatcgccgatttcgagccctcctatcgcctgccg
aaagatctgctgcgcaccagcgaatacctgacgcatccgatcttccacatgaaccgcgcc
gaaagcgaaatgacccgctacatccgccggctctccgaccgcgatctggctctcgaccgc
tcgatgatcccgctcggctcctgcacgatgaagctgaacgcgacggcagaaatgctgccg
atcacctggccggaattttccgatatccatcctttcgtgccggacgaccaggcgctcggc
tatcgcgaaatgatcgatgacctgacggaaaagctctgcgccgtcaccggctacgacgcc
ttctccatgcagccgaattccggtgcgcagggcgaatatgccggcctcttgaccatccgc
aactaccacatggccgacggccagggtcaccgcgacgtctgcctcatcccgacctccgcg
cacggcaccaatccggcctcggcccagatggccggcatgaaggtcgtcgtcgtcaaggtc
cgtgaaaatggcgatatcgacctcgacgatttccgcgccaaggcggaagaacatgcggca
aacctgtcctgctgcatgatcacctatccgtcgacgcatggcgtcttcgaggaaaccgtc
aaggaaatctgcgacctcgtgcatcagcacggcggccaggtctatctcgacggcgccaac
atgaacgccatggtcggcctgtcccgccccggtgacatcggctctgatgtctcgcacctc
aacctgcacaagaccttctgcatcccgcatggcggcggcggtccgggcatgggtccgatc
ggcgtcaagtcgcatctggcaccccacctgcccggccatccggaaaccgatggccgttcg
ggcgcggtttcggcagcagctttcggttcggcctccatcctgccgatctcctggagctac
tgcctgatgatgggcggcgaaggcctgacgcaggcaacgaaggtggcgatcctcaacgcc
aactacatcgctgcccgcctcaagggcgcttacgacgtgctctacaagtcggctgccggt
cgtgtggcgcatgaatgcatcatcgacacgcggccgctggtcgacagcgccggcgtcacc
gtcgatgacgtcgccaagcgcctgatcgactgcggcttccacgcaccgaccatgagctgg
ccggttgccggcacgctgatgatcgagccgaccgagtccgaaaccaaagccgaactcgat
cgcttctgcgaagccatgctggcgatccgtcaggaagcccgcgacatagaggaaggccgt
tcggacaagctgaacaacccgctgaagaatgccccgcacacggtggaagacctcgtcggc
gaatgggatcgcccctattcgcgcgaacaggcctgcttcccgcccggcgctttccgcgtg
gacaagtactggtcgccggtcaaccgcgtcgacaacgtctatggcgaccgcaacctgatc
tgcacctgcccgcctgtcgaggcgtacgcggaggcagccgaatag
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