Rhizobium sp. WYJ-E13: KQ933_09225
Help
Entry
KQ933_09225 CDS
T11043
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQ933_09225 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_09225 (uvrB)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQ933_09225 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KQ933_09225 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
UB2H
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QWW69858
LinkDB
All DBs
Position
1839043..1841985
Genome browser
AA seq
980 aa
AA seq
DB search
MAKSPKKSPASTGFEEAPQSSFEGAPLSGSVADWVKQLEADAEAAGVESQREIASKAGKH
RKKVENEARKHTEAVSVNKKATVSKTARGVSIGGSSDPKTRAAAGLNPVAGLDISLEDAG
NLAQGGVTATVEALSKLIESGNPLHKNGKIWTPHRPARPDKSEGGIAIRMNSEYQPAGDQ
PTAIRDLVGGLETGERSQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQLYSEF
KNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCI
IVASVSCIYGIGSVETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRG
DTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLN
AAIKSIKEELKGRLVELEKAGRLLEAQRLEQRTRYDLEMLEATGSCQGIENYSRYLTGRD
PGDPPPTLFEYVPDNAIVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPL
RFEEWDAMRPDTIAVSATPGNWEMEQAGGVFAEQVIRPTGLIDPPVEVRSARSQVDDVLG
EIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAF
DVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNI
TGSMQRAMDETARRREKQMAYNQEHGITPESVKAKISDILDSVYERDHVRADISGASGKG
FADGGNLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAVELAAMDDPLARE
EAKAMEGKSRGGSSGAPSSSGSSRGSATVEATQATYFAKPHLDEMGRHVATPADGKSLFR
RNTLDEMTVGRTEKPVTGHVPEKPEASMGTKRFSPLLEGQPERDDVRPLVRGKTGVGSYE
DPGEQRRKGRTKNKTGRPGR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctccgaagaaatcccccgcctcgaccggtttcgaggaagccccccaatcg
tctttcgaaggcgctcccctctcaggctccgttgccgactgggtgaagcagctcgaggcg
gatgcggaggccgccggtgtcgaaagccagcgcgaaatcgcctccaaggcgggcaagcac
cgcaagaaggtcgagaacgaggcgcgcaagcacaccgaggccgtcagcgtcaacaagaag
gcgacggtgagcaagaccgcacgcggcgtctccatcggcgggtccagcgatccgaagacg
cgcgcggccgcgggcctgaacccggtcgcgggtctcgatatttcgcttgaggatgccggt
aatctggcgcaaggcggcgtcaccgccacggtggaggcgctgtccaagctgatcgagagc
ggcaacccgctgcacaagaacggcaagatctggacgccgcaccgccctgcccggccggat
aaatccgaaggcggcatcgccatccgcatgaactccgaataccagcccgccggcgaccag
ccgacggcgatccgcgatctcgtgggcgggctggagaccggcgagcgcagccaggttctg
ctcggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaggaaacgcag
cgcccggccctgatcctcgcgccgaacaagacgctggccgcccagctctattccgaattc
aagaatttcttccccgacaatgcggtggaatatttcgtttcctactacgattattaccag
ccggaagcctatgtgccgcgctccgatacctatatcgagaaggaaagctccatcaacgag
cagatcgaccgcatgcgccactcggcgacgcgttcgctgctcgaacgcgacgactgcatc
atcgtcgcctccgtctcctgcatctatggtatcggctcggtcgaaacctatacggccatg
accttccagatgaatgtcggcgacaggctggatcagcgccagctgctggccgatctcgtg
gcccagcaatacaaacgccgcgacatggatttccagcgcggttcttttcgcgtgcgcggc
gacacgatcgaaatcttcccggcccaccttgaggatgccgcctggcgcatcagcatgttc
ggcgacgagatcgacgccatcaccgaattcgacccgctgaccggccagaagaccggcgac
ctgaaatcggtgaagatctacgccaactcacactatgtcaccccgcgcccgacgctgaat
gccgcgatcaaatccatcaaggaggagctgaagggccgcctcgtggagcttgaaaaggcc
ggccgcctgctggaggcgcagcgcctggagcagcgtacccgctacgatctggaaatgctg
gaagcgacaggctcctgccagggcatcgaaaactattcgcgctacctcaccggccgcgac
cccggcgacccgccgccgacgctgttcgaatatgtgcctgacaatgccatcgtcttcatc
gacgaaagccacgtcaccattccgcagatcggcggcatgtaccggggcgacttccggcgc
aaggcgacgctggccgaatatggcttccgcctgccctcctgcatggataaccgcccgctg
cgcttcgaggaatgggacgccatgcgcccggatacgatcgccgtctcggcgaccccgggc
aactgggaaatggaacaggccggcggcgtcttcgccgaacaggtcatccgcccaaccggc
ctcatcgatccgcccgtcgaggtgcgctccgcccgcagccaggtggacgacgtgctcggc
gaaatccgcgagacggccgccaagggctatcgcaccctctgcaccgtgctgaccaagcgc
atggccgaggacctgaccgaatatctgcatgaacagggtgttcgcgtgcgctacatgcac
tcggatatcgacacgctggagcgcatcgagatcatccgcgacctgcgcctcggcgctttc
gacgtgctcgtcggcatcaacctcttgcgcgagggcctggatattcccgaatgcggcttc
gtcgccattctcgacgccgacaaggaaggcttcctgcgctccgagacctcgctgatccag
acgatcggccgcgccgcccgtaacgtcgacggcaaggtcatcctctacgccgacaacatc
accggctccatgcagcgcgccatggacgagacggcgcggcgccgcgaaaagcagatggcc
tataaccaggagcacggcatcacgcccgaaagcgtcaaggccaagatctccgatatcctc
gactcggtctacgagcgcgaccacgtccgcgccgatatctccggcgcctccggcaaaggc
ttcgccgatggcggcaacctcgtcggcaacaacctgcaggcccatctcaacgcgctcgaa
aagtccatgcgcgacgccgccgccgacctcgacttcgaaaaggccgcccgcctgcgcgac
gaaatcaaacgcctcaaggcggtggaactcgccgccatggacgatcctctggcgagagag
gaagccaaggcgatggaaggcaagagccgcggcggctcctccggcgctccgtcatcctcg
ggctcgtcccgaggatctgccacggtcgaagcgacgcaggccacctacttcgccaaaccc
cacctcgacgaaatgggccgccacgtcgccaccccggccgacggcaagagcctcttccgc
cgcaacacgctggacgagatgaccgtgggccggacggaaaagccggtgaccgggcatgtg
ccggagaagccggaagcgtcgatgggcacgaagcggttttcgccgctgcttgagggccag
ccggagcgcgatgatgtgcgtccgctggtgcgtgggaagacgggtgttgggagttatgag
gatcctggcgagcagaggcgcaaggggcggacgaagaataagaccgggcggccggggcgg
tga
DBGET
integrated database retrieval system
