Rhizobium sp. WYJ-E13: KQ933_13235
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Entry
KQ933_13235 CDS
T11043
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ933_13235 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhiw03019
]
KQ933_13235 (recQ)
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_13235 (recQ)
Enzymes [BR:
rhiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQ933_13235 (recQ)
Messenger RNA biogenesis [BR:
rhiw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQ933_13235 (recQ)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KQ933_13235 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
GD_AH_C
Motif
Other DBs
NCBI-ProteinID:
QWW66583
LinkDB
All DBs
Position
complement(2619131..2620996)
Genome browser
AA seq
621 aa
AA seq
DB search
MPQTERDEPLFSASDALFAGTAQPLDVLKRVYGYSAFRGRQQEVVEHVVAGGDAVVLFPT
GAGKSLCFQIPALCRQGLGIVVSPLIALMRDQVEAMKQLGIRAAALNSSISREEYVAIRR
GISSGDLDLLYVTPERILMDGFRELIGNAKIALFAIDEAHCVSQWGHDFRPEYRELGKLT
EQYPDVPRIALTATADPHTREDIIERLMLDNAAVFTTSFDRPNISYEIVERDQPRQQLLR
FLSGHKGNSGIVYCLSRAKVEETADWLNTQGIRALPYHAGMDRALRDANQDAFLKEEELC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRR
RMIDEGNAADEIKRIERGKLNALLAICETASCRRQAILAHFGEAHGGKCGGCDTCLKPVE
TWDGTEAAIKALAAVYRTGERFGAGHVIDVLVGNVNEKTERFRHVDMPVFGAGKDIAVRT
WQSVYRQLMAMGLIRVDHEAFGALKLEPEARAVFKREREVFFRKDRAPSERRAKKTERAE
RRTGLSGADGALFEALRAERMSIAKSLGVPPYVVFPDTTLIAFATERPRSRRELLGISGV
GQSKLERYGDAFLDIILSHDE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaccgaacgcgacgaaccgctattctccgcctccgatgccctgtttgcaggc
acggcgcagccgctcgacgtgctgaagcgcgtctatggctattccgcctttcgcggcagg
cagcaggaagtggtcgagcatgtcgtcgccggcggcgatgccgtcgtgctcttcccgacc
ggggccggcaagtcgctctgcttccagatcccggccctttgccgccagggtctcggcatc
gtcgtctcgccgctgattgcgctgatgcgtgatcaggtcgaggcgatgaaacagctcggc
attcgtgccgcagcgctcaattcctcgatatcgcgcgaggaatatgtcgcaatccgccgc
ggcatttcctccggcgatctcgacctgctctatgtcaccccggagcgtatcctgatggat
ggtttccgcgagttgatcggcaatgcgaagatcgcgctgttcgcgatcgacgaagcgcat
tgcgtctcgcagtggggccatgatttccggccggaatatcgcgaactcggcaagctcacc
gagcaatatcccgacgtgccgcgcatcgcgctgacggctaccgccgatccgcacacgcgg
gaagacattatcgagcggctgatgctcgataatgccgctgttttcacgacgagcttcgac
cggccgaatatttcctatgagatcgtcgaacgagatcagccgcgccagcaactcctgcgc
tttctctccggccacaagggcaacagcggcatcgtctattgcctgtcgcgcgccaaggtg
gaggaaacggcggactggctgaacacgcagggcatccgggcgctgccctatcacgccggc
atggaccgggcgctgcgtgacgccaaccaggatgccttcctgaaggaagaagaactctgc
cttgttgcgactgtcgccttcggtatgggcatcgataagccgaatgtgcgctatgtcgcc
catctcgatctgccgggctcggtcgaggcctattatcaggagacaggccgcgcgggacgt
gacggcctgccgtccgaggtatggatggcttacggcatggccgatgtcatccagcgccgg
cggatgatcgatgagggcaatgcggccgacgagatcaagcgtatcgagcgcggcaagctg
aatgcgctgctggcgatctgcgagacggcatcctgccggaggcaggcgatcctggcgcat
tttggcgaagcacacgggggcaagtgcggcggctgcgatacctgcctgaagccggtcgag
acctgggatggaacggaggcggcgatcaaggcgttggcggcagtctatcgcaccggcgaa
cgttttggcgccggccatgtcatcgacgtgctcgtcggtaatgtcaacgagaagaccgag
cgcttccgccatgtcgatatgcccgtcttcggcgccggcaaggatattgctgttcggaca
tggcaatcggtctatcgccagcttatggcgatggggctgatccgtgtcgatcacgaggct
ttcggagctctgaagctggagccggaggcgcgcgccgtcttcaagcgcgagcgcgaggtc
ttcttccgcaaggatcgcgcgccctccgaacgccgggcgaaaaagaccgagcgcgcggag
cgcaggaccggactttcgggtgcggacggcgcgctcttcgaagcgctcagggccgagcga
atgtcgattgccaagtcgcttggcgtaccgccctatgtcgtcttcccggatacgacgctg
atcgccttcgccaccgagcggccgcgcagccgcagggaactgctcggcatttccggcgtc
ggccagtcgaagctcgaacgttacggcgacgctttcctcgatatcatcctctcgcacgac
gaatag
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