Rhizobium sp. WYJ-E13: KQ933_13310
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Entry
KQ933_13310 CDS
T11043
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00220
Arginine biosynthesis
rhiw00240
Pyrimidine metabolism
rhiw00250
Alanine, aspartate and glutamate metabolism
rhiw01100
Metabolic pathways
rhiw01110
Biosynthesis of secondary metabolites
rhiw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KQ933_13310 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KQ933_13310 (carB)
00220 Arginine biosynthesis
KQ933_13310 (carB)
Enzymes [BR:
rhiw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KQ933_13310 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
CoA_binding_2
RimK
CbiA
Motif
Other DBs
NCBI-ProteinID:
QWW66598
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All DBs
Position
2636397..2639882
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AA seq
1161 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
AAIDKAEDRALFREAMAKIGLETPRSMLANATDIKDTDRKTHEAERAKLRESLSGADLDK
ALDELENQWNLGESDRKQRYMSHAMAIAAQALDHVGLPAIIRPSFTLGGTGGGIAYNRSE
FFEIVGGGLDASPTTEVLVEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPVLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPDSEEGESSHNAI
RAAIGTPTPDRLRMVAQALRMGLSIEEVHEGCKIDPWFIAQLKNIVDMEARIREHGLPDD
ATNLRMLKAMGFSDARLATLTGKRPKEVAELRNGLNVRPVFKRIDTCAAEFASPTAYMYS
TYETPFVGTARSEALVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGYEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEILRAEQEKGEVVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARLVAAEIGFPLVVRP
SYVLGGRAMQILHSEGQLQTYLLDTVPELVPEDIKARYPNDKTGQINTLLGKNPLLFDSY
LSHAIEVDVDCLSDGTDVYVAGIMEHIEEAGIHSGDSACSLPPRTLSREMLDELERQAKA
MAKALNVGGLMNVQFAIKDDTVYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
ATFAAYGEKPDPRALKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVELPREGTVFVSVRDADKPRVLPAIRMLVEQGFKVLATGGTARFLAENGIEATK
INKVLEGRPHIEDAIRNRQVQLVINTTDGNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
AQAIKALKAGNLEVRPLQSYF
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagacatcaaatcgatcctcatcatcggcgcgggaccgatcgtcatt
ggccaggcttgcgaattcgactattccggcacccaggcctgcaaggcgctgaaggaggaa
ggctaccgcgtcatcctcgtcaattccaacccggcgacgatcatgaccgatccgggtttg
gccgatgcaacctatgtcgagccgatcacccctgaagtcgtcgccaagatcatcgccaag
gagcgcccggacgcgctgctgccgaccatgggcggccagacggcgctgaacaccgccctc
tccttgaagcgcatgggcgtgctcgaccgctacaatgtcgagatgatcggcgccaagcct
gccgcgatcgacaaggccgaagaccgcgccctcttccgcgaggcgatggccaagatcggc
ctcgaaaccccgcgctcgatgctggcaaacgccaccgacatcaaagataccgaccgcaag
acgcatgaggccgaacgcgccaagctgcgcgaaagcctctccggcgccgacctcgacaag
gcgctcgacgaactcgaaaaccagtggaacctcggcgagagcgaccgcaagcagcgctac
atgagccatgcgatggcgatcgccgcccaggcgctcgaccatgtcggcctgccggccatc
atccgcccgtccttcacgctcggcggcaccggcggcggcattgcctataaccgctcggaa
ttcttcgagatcgtcggcggcggcctcgatgcctcgccgaccaccgaagtgctcgtcgaa
gaatccgttctcggctggaaggaatatgagatggaggtcgtccgcgacaaggcggataac
tgcatcatcatctgctccatcgaaaacatcgatccgatgggtgtccataccggcgactcg
atcaccgttgccccggcgctgacgctgacggacaaggaataccagatcatgcgcaacgcc
tcgatcgcggtgctgcgcgagatcggcgtcgagaccggcggctcgaacgtgcagttcgcc
gtcaacccgaaggacggccgcctcgtcgtcatcgaaatgaacccgcgcgtgtcgcgctcg
tctgcactggcttcgaaggccaccggcttcccgatcgccaagatcgccgccaagcttgcg
atcggctatacgctcgacgaactcgaaaacgacattaccggcggcgcgacgccggcgtcg
ttcgaaccgtcgatcgactatgtcgtcaccaagatcccgcgcttcgcttttgagaaattc
cccggcgcctcgccggtgctgaccacggccatgaagtcggtcggcgaagtcatggcgatc
ggtcgcaccttcgccgaatcgctgcagaaagcgctgcgcggcctcgaaaccggcctgacc
ggcctcgatgaaatcgaaatccccgactccgaggaaggcgaatccagccacaacgccatc
cgcgccgcaattggcacgccgaccccggatcgcctgcgcatggtcgcccaggcactgcgc
atgggcctcagcatcgaagaggtgcacgaaggctgcaagatcgatccgtggttcatcgcc
cagctcaagaacatcgtcgatatggaagcccgcatccgcgagcacggcctacctgacgat
gccaccaatctgcgcatgctgaaggccatgggcttctccgacgcccgccttgccacactg
accggcaagcgcccgaaggaagtggccgagcttcgcaacggcctgaacgtccgcccggtc
ttcaagcgtatcgatacctgcgctgccgaattcgcctcgccgaccgcttatatgtactcc
acctacgagacacccttcgtcggcactgcgcgctctgaagctctcgtgtccgaccgcaag
aaggtcgtcatcctcggcggcggcccgaaccgtatcggccagggcattgagttcgactat
tgctgctgccacgccgccttcgcgctgaaggatgccggctatgaagcgatcatgatcaac
tgcaacccggaaacggtctcgaccgactacgacacgtcagatcgcctctatttcgagcca
ctgacggccgaagatgtgattgaaatcctgcgcgcagagcaggaaaagggcgaagtcgtc
ggcgtcatcgtccagtttggcggccagacaccgctgaagcttgcagaagccttggaaaag
aacggcatcccgatcctcggcaccgcgcccgatatgatcgacctcgctgaagaccgcgac
cgcttccagaagctgctgatgaagctcgatctcaaccagccgaacaacggcatcgcctac
tcagtcgagcaggcccgtctcgtcgcggctgaaatcggcttcccgctggtcgttcgcccg
tcctacgtgctcggcggtcgcgccatgcagatcctgcattccgaaggccagctccagacc
tatttgctcgataccgttccggaactggtgcccgaagatatcaaggcgcgttacccgaac
gacaagaccggccagatcaacaccctgctcggcaagaacccgctgctgttcgacagctat
ctcagccacgccatcgaagtggatgtcgactgcctgtccgacggcacggacgtctatgtc
gccggaatcatggaacatatcgaggaagccggtatccattcgggcgatagtgcctgctcg
ctgccaccccgcacgctctcccgcgaaatgctcgacgagctggaacgccaggccaaggcg
atggcgaaagcgctcaatgtcggcggcctgatgaacgtacagttcgccatcaaggacgac
actgtctacgttctcgaagtcaacccgcgcgcttcccgtaccgtgcccttcgtcgccaag
accatcggcgcgccgatcgccaagatcgccgcgcgcgtcatggccggcgagaagctcgat
gcgaccttcgcagcctatggcgaaaagcccgacccgcgtgccctcaagcacatcgccgtc
aaggaagctgtcttccccttcgcccgcttccccggcgtcgatacgctgctcggaccggaa
atgcgctccaccggcgaagtcatcggcctcgacaccgatttcgcgctggccttcgccaag
tcgcaactcggcgccggcgtcgaactgccgcgtgaaggcacggtcttcgtctccgtgcgc
gacgccgacaagccgcgcgtcctgccggcaatccgcatgctggtcgagcaaggcttcaag
gtgctggcgaccggtggcacggcccgcttcctcgcagaaaacggcatcgaagcgaccaag
atcaacaaggttctggaaggccgtccgcacatcgaggatgccatccgcaaccgccaggtc
cagctcgtcatcaacacgaccgacggcaacaaggcgatctcggattcgaagtcgctgcgc
cgcgccacgctgatgcagaaggtaccctactacaccacgatggccggcgccgaagccgcc
gcccaggccatcaaggcgctcaaggccggcaatctcgaagtccgcccgctgcagagctac
ttctga
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