Rhizobium sp. WYJ-E13: KQ933_18120
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Entry
KQ933_18120 CDS
T11043
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00630
Glyoxylate and dicarboxylate metabolism
rhiw00680
Methane metabolism
rhiw01100
Metabolic pathways
rhiw01120
Microbial metabolism in diverse environments
rhiw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KQ933_18120 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
KQ933_18120 (fdhF)
Enzymes [BR:
rhiw01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
KQ933_18120 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4_10
Fer4_2
Fer4_9
Fer4_16
Fer4_4
Fer4_15
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
QWW67495
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Position
complement(3640973..3643852)
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AA seq
959 aa
AA seq
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MSLVHEIDYGTPASKSETMVTLTIDGRQVTVPEGTSIMRASMEAGIEVPKLCATDMIDAF
GSCRLCLIEIDGRNGTPASCTTPVASGIVVHTQTERLKNIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARNNDEINLKWMPKDESNPYFTFDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFSSSVSPGMHEHFVDSECVSCGACVQACPTATLTEKS
VIRIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRILNPMIREKVTDPWREVTWDEAYAHVASEFRRIQYQYGREAIGGITSSRCTNEET
YLVQKLVRAGFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEQSDVVVIIGANP
TDGHPVFASRLKKRLRQGAKLVVIDPRRIDIVRSPHVEASFHLPLKPGTNVAVMTALAHV
IVTEGLYDEKFIRERCDWSEFEDWAAFVAEPQHSPEAVEKFTGVKPEDVRGAARLYATGG
NGAIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKINNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMT
PRNGYADWEVTQTLARAMGLDWHYEHPSEIMDEIAATTPSFASVSYDYLEKMGSVQWPCN
EAHPLGSPIMHVDGFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRT
DNVVWHSEDRLEIHPHDAEQRGIRDGDWVKLGSRSGDTTLRALITDRVAPGVVYTTFHHP
DTQANVITTDFSDWATNCPEYKVTAVQVSPSNGPSDWQIEYDEQARQSRRVVGKMEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgttcacgaaatcgattacggaacgccggcctcgaaatccgaaacgatggtg
acgctgaccatcgacggccggcaggtgactgtccccgagggaacgtcgatcatgcgcgcc
tccatggaggccggcatcgaggtgccgaaactctgcgcaaccgatatgatcgatgccttc
ggttcctgccgcctctgtctcatcgagatcgacggacgcaacggaacgcctgcctcctgc
accacgccggtggcctccggcatcgtcgtccatacgcagaccgagcgcctgaagaatatc
cgccgcggcgtcatggagctctatatctccgaccatccgctcgactgtctgacctgcgct
gccaacggtgactgcgaactacaggatatggcaggcgccgttggtcttcgcgacgtgcgt
tacggctatgagggcgacaaccacgtcaaggctcgcaacaatgatgagatcaatctgaaa
tggatgccgaaggacgagtccaatccgtacttcacctttgatccgtcgaagtgcatcgtc
tgctcccgctgtgtgcgcgcctgcgaggaggtgcagggcacctttgcgctgacgatcgaa
gggcgcggtttcagttcgagcgtttcaccaggcatgcatgagcatttcgttgattccgaa
tgcgtatcctgcggcgcctgcgtacaggcctgtccgaccgcgacgctgacggaaaaatcg
gtcatccgcatcggccagccggaacattcggttgttaccacctgcgcctattgcggcgtc
ggctgttccttcaaggcggaaatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacgggcaggccaatcgcggtcactcctgcgtcaaaggccgcttcgcctacggctactcg
acgcacaaggaccgtatcctcaatccgatgatccgtgaaaaagtgacagatccctggcgt
gaggtcacgtgggacgaggcctatgcacatgtcgcttccgagttccgccgcatccagtat
caatatggccgcgaagcgatcggcggtatcacatcgtcccgctgcaccaatgaagagact
tatcttgtccagaagctggttcgcgccggcttcggcaacaataatgtcgatacctgcgcc
cgcgtctgccattcgccgacaggttatggtctcggccaggctttcgggacctctgccggc
acgcagaattttgacagcgtcgagcagtccgatgtggtcgtcataatcggcgccaatccg
accgatgggcaccccgtcttcgcttcgcgcctgaagaagcgcctgcgacagggcgccaaa
cttgttgtcatcgatccgcgccgcatcgatatcgtccgctcgccgcatgtcgaagcatcc
ttccacctgccgctgaaacccggcaccaatgtcgctgttatgacggcgctggcgcatgtg
atcgtgaccgaaggcctgtacgacgagaaattcatccgcgagcgttgcgactggtcggaa
ttcgaagattgggcagctttcgtggctgagccgcagcatagccctgaagccgtcgagaaa
ttcaccggtgtcaagccggaagacgtgcgtggtgctgcccggctttatgcgaccggcggg
aacggcgccatctattacggcctcggcgtgaccgaacacagtcagggttcgacgaccgtc
atggcgatcgccaacctcgcaatggcgaccggcaacatcggtcgtccgggtgtcggcgtg
aacccgctgcgcggccagaacaatgtgcagggttcgtgcgacatgggctccttcccacac
gaacttccgggctatcgtcatatctccgacgatgcaacgcgcgatatcttcgaaaagctc
tggggcgtgaagatcaacaacgagccgggtttgcgcatcccgaacatgctggatgctgcc
gtcgatggttccttcaaggggatctacattcagggtgaagacattctgcagtccgatccg
gataccaagcatgtggccgccggccttgccgctatggaatgcgtcgtcgtgcaggatctc
ttcctgaacgaaacagcgaattatgcccatgtcttcctgccgggttccaccttcctggaa
aaggacggtacgttcaccaatgccgagcgccgcattaaccgtgtgcgcaaggtaatgacg
ccgcgcaatggctatgcggattgggaagtgacgcagacgctcgcccgggccatgggccta
gactggcattatgagcatccgtccgaaatcatggacgagattgccgctacgacgccgagc
ttcgcttcggtttcttacgactatctcgaaaagatgggctcggttcagtggccctgcaac
gaggcgcatccgctcggctcgccgatcatgcatgtggacgggttcgtacgcggcaagggc
aagttcatccgtacggaatatgtggcgaccgacgagcgcaccggtccgcgcttcccgctg
cttctcacgaccgggcgtattctcagccagtacaatgtcggggcgcagacgcgccgcacc
gacaatgtcgtctggcattccgaagacaggctggagatccacccgcatgatgccgagcag
cgcggcatccgcgatggcgactgggtaaagctcggcagccgctcgggcgatacgacgctt
cgcgcgttgatcaccgatcgcgtggcgcccggcgtcgtctatacaaccttccatcatccg
gatacgcaggcaaacgtcatcacaaccgacttctccgactgggcgacgaactgcccggaa
tacaaggtgacggcggtgcaggtctcgccatccaacgggccctccgactggcagatcgag
tatgatgaacaggctcgccagtctcgccgtgtcgtcggcaagatggaggccgccgaataa
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