KEGG   Rhizobium sp. WYJ-E13: KQ933_18255
Entry
KQ933_18255       CDS       T11043                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhiw  Rhizobium sp. WYJ-E13
Pathway
rhiw00010  Glycolysis / Gluconeogenesis
rhiw00020  Citrate cycle (TCA cycle)
rhiw00260  Glycine, serine and threonine metabolism
rhiw00280  Valine, leucine and isoleucine degradation
rhiw00310  Lysine degradation
rhiw00380  Tryptophan metabolism
rhiw00620  Pyruvate metabolism
rhiw00630  Glyoxylate and dicarboxylate metabolism
rhiw00640  Propanoate metabolism
rhiw00670  One carbon pool by folate
rhiw00785  Lipoic acid metabolism
rhiw01100  Metabolic pathways
rhiw01110  Biosynthesis of secondary metabolites
rhiw01120  Microbial metabolism in diverse environments
rhiw01200  Carbon metabolism
rhiw01210  2-Oxocarboxylic acid metabolism
rhiw01240  Biosynthesis of cofactors
Module
rhiw_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhiw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhiw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhiw_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhiw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KQ933_18255 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KQ933_18255 (lpdA)
   00620 Pyruvate metabolism
    KQ933_18255 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KQ933_18255 (lpdA)
   00640 Propanoate metabolism
    KQ933_18255 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KQ933_18255 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KQ933_18255 (lpdA)
   00310 Lysine degradation
    KQ933_18255 (lpdA)
   00380 Tryptophan metabolism
    KQ933_18255 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KQ933_18255 (lpdA)
   00670 One carbon pool by folate
    KQ933_18255 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhiw04147]
    KQ933_18255 (lpdA)
Enzymes [BR:rhiw01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KQ933_18255 (lpdA)
Exosome [BR:rhiw04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KQ933_18255 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 NAD_binding_8 GIDA FAD_binding_2 HI0933_like Lys_Orn_oxgnase AlaDh_PNT_C Thi4 FAD_binding_3 DAO DUF4236 DUF5722 Lycopene_cycl
Other DBs
NCBI-ProteinID: QWW67519
LinkDB
Position
complement(3668316..3669719)
AA seq 467 aa
MSYDVIVIGTGPGGYVAAIKAAQLGLKVAVVEKRATYGGTCLNVGCIPSKALLHASEMFH
ATHHMEELGIEVAAPKLNLEKMLAHKDATVKSNVDGVAFLFKKNKIDAFHGTGKIVSTGK
VSVTAEDGTVQEIEGKNIVIATGSDVAGIPGVNVDIDEKIVVSSTGAIALEKVPETMIVV
GGGVIGLELGSVWSRLGAKVTVIEFLDKILGPMDADVSKQFQRMLGKQGIDINLSSKVTG
VEKGGKGAKVTFEPVAGGAAQTLEADVVLISTGRIPYTAGLGLEEAGVKLDNRGRVEIDG
HFKTNVEGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQHGHVNYDVIPSVVYTQPEVAS
VGKTEEELKAAGVAYKVGKFPFSANGRARAMLATDGFVKILSDKETDRVLGGHIVGFGAG
EMIHEIAVLMEFGGSAEDLGRTCHAHPTMSEAVKEAALAAFFKPIHM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtcctatgatgtgattgttatcggaaccggccctggcggctatgtcgcggcaatcaag
gctgcgcagcttggcctcaaggtcgcggtcgtcgagaagcgcgccacctatggcggtacc
tgcctgaatgtcggctgcatcccttccaaggcgctgctgcatgcttccgagatgttccat
gcgacgcatcatatggaagagttgggcatcgaagtcgccgctccgaagctcaatctcgaa
aagatgctggcgcacaaggatgcgacggtaaagtccaacgtcgacggcgttgccttcctg
tttaagaagaacaagattgacgccttccacggcaccggcaagatcgtctccaccggcaag
gtctcagtgaccgccgaagacggcacggttcaggaaatcgaaggcaagaacatcgtcatc
gccacgggttccgacgtcgccggcatcccgggtgtgaacgtcgatatcgatgagaagatc
gtcgtatcctccaccggcgccatcgcgctggaaaaggtaccggaaacgatgatcgtcgtc
ggcggtggcgtcattggcctcgagctcggctcggtctggtcgcgtctcggcgcaaaggtc
actgtcatcgaatttctcgacaagatcctcggtccgatggatgccgatgtttccaagcag
ttccagcgtatgcttggcaagcagggcatcgatatcaacctgagctccaaggtgacgggg
gttgaaaagggtggcaagggcgccaaggtgacctttgagccggtcgccggcggcgctgcc
cagacgcttgaagctgatgtcgttctcatctccaccggccgtattccgtacacggccggc
ctcggtctcgaagaagcaggcgtcaagctcgacaatcgcggccgcgtcgaaatcgacggc
cacttcaagaccaatgtcgaaggcatctatgcaatcggcgacgtcgtgaagggtccgatg
ctggcgcataaggcagaagacgaaggcgtcgcgcttgccgaaatcctcgctggccagcac
ggccatgtgaattacgacgtgattccgagcgtcgtctacacacagcccgaagtcgcttcc
gtcggcaagaccgaagaagagctgaaggctgcaggcgtcgcctacaaggttggcaagttc
ccgttctcggccaacggtcgtgctcgcgccatgctggcgacggacggtttcgtcaagatc
ctgtccgacaaggaaaccgatcgcgtgctcggcggccacattgtcggcttcggcgccggc
gagatgatccacgagatcgccgtgctgatggagttcggtggttccgctgaagacctcggc
cgcacctgccacgcgcatccgaccatgtcggaggccgtgaaggaagcagcgctcgccgca
ttcttcaagccgatccatatgtaa

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