Rhizobium sp. WYJ-E13: KQ933_18255
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Entry
KQ933_18255 CDS
T11043
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00010
Glycolysis / Gluconeogenesis
rhiw00020
Citrate cycle (TCA cycle)
rhiw00260
Glycine, serine and threonine metabolism
rhiw00280
Valine, leucine and isoleucine degradation
rhiw00310
Lysine degradation
rhiw00380
Tryptophan metabolism
rhiw00620
Pyruvate metabolism
rhiw00630
Glyoxylate and dicarboxylate metabolism
rhiw00640
Propanoate metabolism
rhiw00670
One carbon pool by folate
rhiw00785
Lipoic acid metabolism
rhiw01100
Metabolic pathways
rhiw01110
Biosynthesis of secondary metabolites
rhiw01120
Microbial metabolism in diverse environments
rhiw01200
Carbon metabolism
rhiw01210
2-Oxocarboxylic acid metabolism
rhiw01240
Biosynthesis of cofactors
Module
rhiw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhiw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhiw_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhiw_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KQ933_18255 (lpdA)
00020 Citrate cycle (TCA cycle)
KQ933_18255 (lpdA)
00620 Pyruvate metabolism
KQ933_18255 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
KQ933_18255 (lpdA)
00640 Propanoate metabolism
KQ933_18255 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KQ933_18255 (lpdA)
00280 Valine, leucine and isoleucine degradation
KQ933_18255 (lpdA)
00310 Lysine degradation
KQ933_18255 (lpdA)
00380 Tryptophan metabolism
KQ933_18255 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KQ933_18255 (lpdA)
00670 One carbon pool by folate
KQ933_18255 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhiw04147
]
KQ933_18255 (lpdA)
Enzymes [BR:
rhiw01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
KQ933_18255 (lpdA)
Exosome [BR:
rhiw04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
KQ933_18255 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
NAD_binding_8
GIDA
FAD_binding_2
HI0933_like
Lys_Orn_oxgnase
AlaDh_PNT_C
Thi4
FAD_binding_3
DAO
DUF4236
DUF5722
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QWW67519
LinkDB
All DBs
Position
complement(3668316..3669719)
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AA seq
467 aa
AA seq
DB search
MSYDVIVIGTGPGGYVAAIKAAQLGLKVAVVEKRATYGGTCLNVGCIPSKALLHASEMFH
ATHHMEELGIEVAAPKLNLEKMLAHKDATVKSNVDGVAFLFKKNKIDAFHGTGKIVSTGK
VSVTAEDGTVQEIEGKNIVIATGSDVAGIPGVNVDIDEKIVVSSTGAIALEKVPETMIVV
GGGVIGLELGSVWSRLGAKVTVIEFLDKILGPMDADVSKQFQRMLGKQGIDINLSSKVTG
VEKGGKGAKVTFEPVAGGAAQTLEADVVLISTGRIPYTAGLGLEEAGVKLDNRGRVEIDG
HFKTNVEGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQHGHVNYDVIPSVVYTQPEVAS
VGKTEEELKAAGVAYKVGKFPFSANGRARAMLATDGFVKILSDKETDRVLGGHIVGFGAG
EMIHEIAVLMEFGGSAEDLGRTCHAHPTMSEAVKEAALAAFFKPIHM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgatgtgattgttatcggaaccggccctggcggctatgtcgcggcaatcaag
gctgcgcagcttggcctcaaggtcgcggtcgtcgagaagcgcgccacctatggcggtacc
tgcctgaatgtcggctgcatcccttccaaggcgctgctgcatgcttccgagatgttccat
gcgacgcatcatatggaagagttgggcatcgaagtcgccgctccgaagctcaatctcgaa
aagatgctggcgcacaaggatgcgacggtaaagtccaacgtcgacggcgttgccttcctg
tttaagaagaacaagattgacgccttccacggcaccggcaagatcgtctccaccggcaag
gtctcagtgaccgccgaagacggcacggttcaggaaatcgaaggcaagaacatcgtcatc
gccacgggttccgacgtcgccggcatcccgggtgtgaacgtcgatatcgatgagaagatc
gtcgtatcctccaccggcgccatcgcgctggaaaaggtaccggaaacgatgatcgtcgtc
ggcggtggcgtcattggcctcgagctcggctcggtctggtcgcgtctcggcgcaaaggtc
actgtcatcgaatttctcgacaagatcctcggtccgatggatgccgatgtttccaagcag
ttccagcgtatgcttggcaagcagggcatcgatatcaacctgagctccaaggtgacgggg
gttgaaaagggtggcaagggcgccaaggtgacctttgagccggtcgccggcggcgctgcc
cagacgcttgaagctgatgtcgttctcatctccaccggccgtattccgtacacggccggc
ctcggtctcgaagaagcaggcgtcaagctcgacaatcgcggccgcgtcgaaatcgacggc
cacttcaagaccaatgtcgaaggcatctatgcaatcggcgacgtcgtgaagggtccgatg
ctggcgcataaggcagaagacgaaggcgtcgcgcttgccgaaatcctcgctggccagcac
ggccatgtgaattacgacgtgattccgagcgtcgtctacacacagcccgaagtcgcttcc
gtcggcaagaccgaagaagagctgaaggctgcaggcgtcgcctacaaggttggcaagttc
ccgttctcggccaacggtcgtgctcgcgccatgctggcgacggacggtttcgtcaagatc
ctgtccgacaaggaaaccgatcgcgtgctcggcggccacattgtcggcttcggcgccggc
gagatgatccacgagatcgccgtgctgatggagttcggtggttccgctgaagacctcggc
cgcacctgccacgcgcatccgaccatgtcggaggccgtgaaggaagcagcgctcgccgca
ttcttcaagccgatccatatgtaa
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