Rhizobium sp. WYJ-E13: KQ933_19695
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Entry
KQ933_19695 CDS
T11043
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_19695 (addA)
Enzymes [BR:
rhiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQ933_19695 (addA)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KQ933_19695 (addA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
nSTAND_NTPase5
DEAD
NPHP3_N
AAA_30
Exo5
Motif
Other DBs
NCBI-ProteinID:
QWW67792
LinkDB
All DBs
Position
complement(3977431..3980976)
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AA seq
1181 aa
AA seq
DB search
MIDPTALPEGDDPGTWIGWTTIQQAIASDPARSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLAEWAIFPDEELSKRITQIEGREPDSLKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAATLLADARRSLLTAT
APENDRDLAEAFAYVLNLGDESGLENLLGEIVANRNAIRRFMTAAEQHGGADMLLRKKLG
LSPDDTEQRLAERYWPLPGLSGTVLDLYLSLAAGKGGAKAQDVAEGLRSAARESDIAIRV
QILEKVFLTSKGEPKTDGQFFVKAMLAEAPQLADAIATARAHVVNCRNRLKIMRMHTATH
AALVLADRLNGDYEELKKQRSHLDFEDLITRTADLLTKSGVGPWIHYKLDQGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESSRPVVRTLFAVGDEKQSIYSFQGARPERFSEEKERT
QRRVLNSGLDFSTVRLPLSFRSTSDVLLAVDHIFTPPDNARGLGMEPVVHRSSRIGHPGA
VDLWEMVVPDVIVRDEDWTAPFDATPESAPAAILARRIAHTIGTLVGHETIIEKGKERFI
EAGDILVLVRKRDAFVNALTRELKRRGDIPVAGADRLVLTSHIAVQDLMALGRFLLLPED
DLSLAAVLKSPLFDLSEEDIFAIAALRDDNESVWDHLRKYAADGNERLGATVARLELFLA
QSRNLSVHDFYARVLGSHGGRRQFLARLGTEVSDILDEFLTFALDHETSALPGLQSFIST
LELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIDTEP
GEPPIPLWIPVSDLGNSLTSSDTTRIQLLAEEEYRRLLYVAMTRAADRLIVCGYRGVRLN
NDTWHLMISTALSEEHPHVQKASFSGPDGEWEGVRWRVPQVERSFERMDRSPEQASGETV
PPDLFRPLPPQKQLPRPLSPSGAGTIIDEEADNLLVTSPLFGDPESSDRSLEKGRLIHRM
LQALPDIPVEERAEAAKRYAERAARFWPTVERRALVDSVVKLLEDQRLRAVFNVHAQAEI
SIMGTLTLEGREYAVSGRIDRLAVLPESVVIMDYKTNRVPPVSDEAIPFAHKAQLALYRE
ILKPLYPAKRIDCMLVYTENATIHMLSEQALASALAGLNTK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccgaccgcgcttcccgagggtgacgatcccggcacctggatcggctggacg
acgatccagcaggcgattgcctccgatcccgcccgctcggcctgggtatcggccaatgcc
ggctccggcaagacacacgtcctgacgcagcgggtcatccggctgctgcttgccggcgca
cgtccgtctgcgatcctctgcctcacctatacgaaggccgccgcttccgaaatgtcgaac
cgtgttttcgagcggttggcggaatgggcgattttccccgatgaagaactctccaagcgc
atcacccagatcgaaggtcgtgagccggattctctgaaacttgcagaagctcggcgcctg
ttcgccaaagcgctggaaacgccaggtgggctgaagatccagacgatccacgctttttgc
gaagcgctgctgcaccagtttccgctggaagcaaacgtcgccgggcacttctcggttctc
gacgaccgagcagccgcaacgctgctggccgatgcgcgccgctcgctgctgacggcaacg
gctccggagaatgaccgggacctcgctgaggccttcgcctatgtgctcaatctcggcgat
gaatccgggcttgaaaatttgctcggcgagatcgttgccaaccgcaacgccatacgccgc
ttcatgaccgcagccgaacagcacggcggcgccgacatgttgctgcgaaagaagctcggg
ctctcacccgatgatacggaacagagactggccgaacgatactggccgcttccggggctc
tcgggtacggtgcttgatctctacctgtcgctcgcagctggcaagggcggagcgaaggcg
caggacgtcgccgaaggcctgcgcagcgcagcgcgcgaatccgacatcgcgatacgggtg
cagattctggagaaggtttttctgacgtcaaagggtgagccgaagacggacgggcaattc
ttcgtgaaggccatgcttgccgaggcgccacagcttgccgatgcgatcgccacggcacgc
gctcatgtcgtcaattgtcggaaccggctgaagataatgcggatgcatacggcgacgcat
gccgctctcgtgctcgcagatcgcctaaacggggattacgaggagctgaaaaagcagcgc
agccatctcgacttcgaagatctgattacccgcactgccgatctgctcaccaagagcggc
gtcggcccgtggatccattacaagctcgaccagggaatcgaccatattctcgtcgacgaa
gcgcaggataccagccccattcaatggagcgtcatccagtcgctggcggaggatttcttc
tccggcgaaagttcgcggcccgtggttcgcacgctgtttgcggtgggcgacgaaaagcag
tcgatctactccttccagggcgcacggccggagcggttttctgaagagaaggagcggacg
cagcgccgggtgctgaacagcggccttgacttctcgacggttcgtttgccgctctccttc
cgttccacgtctgacgtcctgctcgctgtcgaccatatcttcaccccgccggacaatgcg
cgaggtctcggcatggagccggtcgtccatcggtccagccgtatcggccatcccggcgct
gtcgatctctgggaaatggtcgtgcctgatgtcatcgtgagggatgaagactggaccgct
cccttcgacgcgacaccagaaagcgccccagcggccatcctggcgcggcgcatcgcccat
acgatcggtaccctcgtcggccacgaaacgattatcgaaaaaggcaaggaacgcttcatc
gaggccggtgatatccttgttctcgtccgcaaacgcgacgccttcgtcaatgcgctgacg
cgcgagctcaaacggcgcggcgacattcccgttgccggcgcggacaggcttgtgctgacc
agccatatcgccgtccaggatctgatggcacttgggcgttttcttctcttgccggaagac
gatctttcgcttgctgccgttttgaagagcccgctcttcgatctctcggaagaggatatt
tttgcgatcgctgcgctgcgtgacgacaatgaaagtgtctgggaccatcttcgcaaatac
gcggccgacggcaacgagcggcttggcgcgaccgtcgcaaggctagaactctttctcgcc
cagtcgcgaaatctctcagtccatgatttctatgcccgggttctcggcagccatggcggc
cggcgtcagtttttggcccggctcggcaccgaggtcagcgatatcctagacgaattcctc
acttttgcgctcgatcacgagacgtcggcgcttccgggcctgcaatccttcatctcgaca
ctggagctcgaggcgcctgaagtgaaacgcgagcaggacaagggccgaaacgaggtgcgc
atcatgacggtgcatgcctccaagggtcttgaagcgccgatcgtctttctggtggacgga
ggttccaaggccttcactcacacgcatctgccaaaactgcggctgatcgataccgaacct
ggcgagccgccgataccgctctggattccggtcagcgatctcggcaattcgttgacatca
agcgatacgacccgcattcagctgcttgccgaggaggaataccggcgcctgctctatgtc
gcaatgacgcgcgcagccgatcggctgatcgtctgcggttatcgcggcgtacggttgaac
aacgatacctggcatctaatgatttccaccgcgctcagcgaagagcatccgcatgtccag
aaggcgagcttttcaggccctgatggggaatgggaaggcgtccgctggcgtgtgccacag
gtcgaacgcagcttcgagcggatggatcgcagcccggaacaggcaagcggcgaaacggtc
ccgccggaccttttccgccctcttccgccgcagaaacaattgccgcggcccctcagtcct
tccggcgctggcacgatcattgatgaggaggccgataatctgctggtgacctcaccgctc
ttcggcgaccctgaaagcagcgatcgctctctggaaaagggccgcctcattcaccggatg
ctgcaggcacttcctgatattccagtggaggagcgggctgaggcggcaaaacgttatgcc
gaacgcgcggcgcgattctggccgacagtcgagcggagagctctggtcgattcggtcgtg
aaacttttggaagatcaaaggctacgagccgtcttcaacgtccatgcgcaggccgagatt
tcgatcatgggaacgttgacgctggaggggcgggaatatgcggtttccggccgcatcgac
cggcttgccgtcctgcccgaaagcgtcgttatcatggactacaagacaaatcgtgtgccg
ccggtaagcgacgaggccatccccttcgcgcacaaggcccagcttgcgctctaccgggaa
atcctgaagccgctctatcctgccaagcggatcgactgcatgctggtatatacggaaaat
gctaccatccatatgctcagtgagcaggctttggcttctgcacttgcaggactcaacaca
aagtga
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integrated database retrieval system
