Rhizobium sp. WYJ-E13: KQ933_19700
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Entry
KQ933_19700 CDS
T11043
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_19700 (addB)
Enzymes [BR:
rhiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQ933_19700 (addB)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KQ933_19700 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QWW67793
LinkDB
All DBs
Position
complement(3980969..3984154)
Genome browser
AA seq
1061 aa
AA seq
DB search
MAERHQPRILTIPSGVPFLKTLAASLCDGRLTPLFRHDPSDPLSLAKVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSESPLVAPASPADAIWLARNLAELIDSIETEDLAWSELAKLDTGDY
AAWWQLTAEFLQIASAFWPDRLVELGRSSPARHRNAILRAEAARLSTIKPAGPIIIAGST
GSLPATADLISAVASLPEGVIVLPGLDLSMPEEHWRLVAPDLLPGQRANPASRTHPQYGL
AILLKRLKLTRGDVQPIAESEAALRFRAEMLSRALTPSEATSEWGEWKKDLPEGAVADAF
ADVSMIEAANEREEATAIAVALRLALERPGSDDESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGTLLQLLLEASLRPGDPVAIVSLLKHPLARFGLERDFLTSSVEALE
LLALRGGVAEVDIGSLEPLLDHQLAEQALDRHAPVWRKSLPPGAIDMARQLARQVGRAVE
PLLSVLARHPGNGGQPKGITLSQWAERTGRALEGVAADEHGNLAGLWSGEAGDALASLLG
EVIDTDGQMEAEGPQWIDIMQALSAGHAVKPGALSHPRLFIFGTLEARLQNVDTLILGSL
NEGSWPGQTANNPFISRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGSTP
TVASRWLQRLLALGGEHFEGQLRERGARFVHWAGQIDQGDSQAAAQRPSPRPPRELQPKS
YSFSEVGRLRRDPYAIYARRVLRLDPIDAFNRDPGAAERGTLYHKIIDRFVREGHIAGTR
EAATAMEVILTELFDMEKLPPHIDAVWRPRFREVARAFMKWEAGRQPDIQKRLTEVRGGV
ELDGIDIRLTGVADRIDIKGPASADIIDYKTGYNPSPTQARALLDPQLALEAAALRAGAF
RDAGSLVPNDLLYVRLRPGSRFLVDKVNNEEASSDKAKSAMQLAEESIDQLVKFVTLLQS
GEKGFTSRLIPAQQFDFGGHYDHLARVAEWATADPDGGGDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcattctcacgatcccgtctggcgttcccttcctgaaa
acgctggcggcatcgctctgcgatggacgcctgacgccactcttccggcatgatcctagc
gatccgctgtctcttgccaaggtgacgatctatttgccgacacggcgagccgtacgcgtg
ctacgttcggaattcgtcgatctgcttggcggccgttcggcaatcctgccggtcattcgc
ccgctgggagagacagatgacgacagcgggtattttgacgaggcgctgcccgcaacgatc
gaccttgcgcagccgctttccaatacggcacggctcctggagctggcgcggctcatcctt
gcctggcgcaacaagctgcccgagatcgtccggcacatccattcggaatcgcccctcgtc
gcgcccgccagcccggcggacgccatctggcttgcccgcaacctggcggaactgatcgat
tcgatcgagaccgaagacctcgcatggtctgagctcgcaaagctcgataccggtgactat
gcggcctggtggcaattgacggccgaattcctacagatcgccagcgccttctggccggat
cggcttgtcgagctcggccgttcctcgccggcccgccatcgcaatgccattctgcgcgcc
gaggccgccaggctttcgacgataaagcctgccgggccgatcatcattgccggttcgacg
ggttcgcttcctgccaccgccgacctcatcagcgccgtggccagcctgcctgaaggcgtt
atcgtactccctggtctcgatctttccatgccggaggaacactggcgtctggttgcaccc
gatctcctgccgggccagcgggccaatccggcgagtcgcacacatccgcaatacggtctt
gccatactcttgaagcgcctgaagcttactcgcggggatgtgcagccgatcgcggaatcc
gaggccgccctgcgcttccgtgccgaaatgctctcacgcgcgctgacgccatccgaagcg
acaagcgaatggggcgaatggaaaaaagacttgcccgaaggagccgtcgccgacgcgttc
gcggatgtttcgatgatcgaagccgcaaacgaacgtgaggaggcaaccgcaatcgccgtt
gccttgcggcttgcgctcgagcggccgggcagcgacgacgaaagccgggcggcgcttatc
acgcccgaccgcaatcttgcccgccgggtcatggcggagctttcccggttcggcattctc
gccgacgattcggctggtacgccgctttcggcgacgccacagggaacgctgctgcaattg
ctgctggaggcgagtctgcgtcccggcgatcccgttgccatcgtctcgctgctgaaacac
ccgcttgcccgcttcgggctggagcgcgactttctgactagctcggtggaagcgctggag
cttctggcgctgcgcggcggcgtggcggaggtggatataggatcgctcgaacccttgctc
gaccaccagcttgcggaacaggcgctcgacaggcatgcgccggtttggcgcaaatcgttg
ccgccaggggcaatcgatatggcccgacagcttgcccggcaggtgggacgcgccgtcgag
ccgctcctatcggtgctggcgcggcatcccggtaacggcggccagccgaaaggcattacg
ctctcgcaatgggccgaacgaacgggccgtgctctggaaggcgtcgctgccgatgaacac
ggcaatctggccggcctctggtccggagaggctggcgatgcccttgcaagcctgcttggt
gaggtgatcgacactgacggccagatggaggcggaggggccgcaatggatcgatatcatg
caggcgctgtcggccggacatgccgtcaagcctggtgcgctcagtcaccctcgcctcttc
atcttcggtacgctggaagcccgtctgcagaatgtcgatacattgatcctcggcagtctc
aatgaaggatcgtggcccggccagaccgccaacaaccccttcatctcccgcatgatgaag
acggaaatcgggctggagccgccggaacggcgcatcggccagctggcacatgacttcgag
atggcgaatggcacacgccacctcatctattcacgcgcgctgcgccagggctcgacgccg
acggtcgcctcccgatggctgcagaggcttctggcgctcggcggagagcattttgaaggg
cagttgcgcgagcgtggcgcccgtttcgttcactgggcgggccagatcgatcaaggcgac
agccaggcagcggcacaaagaccttcgcccaggccgccgcgggagctgcagcccaaatcc
tattccttcagtgaagtcggccggctgcgtcgcgacccctatgctatctatgcgcggcgt
gtactgcgactcgatcccatcgacgccttcaatcgcgatcccggcgcggcagaacgcggc
acgctctatcataagatcatcgaccgctttgtccgcgagggtcatatagccgggacacga
gaagcggctacggcgatggaagtcattctgaccgagctcttcgatatggagaagctgccg
ccgcatatcgacgccgtctggcggccacgcttccgcgaagtcgcacgtgccttcatgaag
tgggaggccggacgacagcccgatattcagaagaggctgacggaagtgagaggcggagtc
gaactcgacggtatcgatatccggctcactggcgttgcggatcgcatcgatatcaaaggg
cctgccagtgccgatatcatcgactacaagaccggttacaacccctctccgacgcaagcc
cgcgcattgctggacccgcagcttgcgctcgaggcagccgcgcttcgcgcaggtgccttc
cgcgatgcaggcagccttgtacccaacgatcttctctatgtccgcctgcggccgggcagc
cgcttcctagtcgataaggtcaacaacgaggaagcgagcagcgacaaggcgaaatcggcg
atgcagctcgctgaggaatcgatcgatcaactcgtgaaattcgtcaccctgttgcagtcg
ggcgaaaagggctttacctcccggctgatccccgcccagcaattcgacttcggtggccat
tacgaccatctcgcccgcgttgcggaatgggcgaccgccgatccggatggaggcggcgat
gattga
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