Rhizobium sp. WYJ-E13: KQ933_20180
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Entry
KQ933_20180 CDS
T11043
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhiw03016
]
KQ933_20180 (truB)
Enzymes [BR:
rhiw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KQ933_20180 (truB)
Transfer RNA biogenesis [BR:
rhiw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KQ933_20180 (truB)
Prokaryotic type
KQ933_20180 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QWW67876
LinkDB
All DBs
Position
complement(4086421..4087353)
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AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPMDFGSTEAVSKIKWLFKAQKCGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTQSSDKRPSEQQIRDILPAYIGTI
SQVPPQFSAIKIAGERAYDLARDGEAVEIPSREVEVHRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELGCYGHISGLRRTFVAPFAEETMVPLAKLTALEEIEDIDERLAALDAL
LIDTCEALSALPHLVISDDQAHRLKMGNPILVRGRDAPVAESEAYATARGRLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccgcccgatttccggctggctgatcctcgacaag
ccgatggatttcggctcgacggaagccgtttccaagatcaagtggctcttcaaggcgcag
aaatgcggccatgccggtacgctcgacccgcttgcttcgggcatgctgccgatcgcgctc
ggcgatgccacaaagaccgttccctatgtgatggacggccgcaagatctatgaattcact
gtcagttggggcgaggagcgggcgaccgacgacctcgagggcgaggttacgcagagctcc
gacaagcgcccgagcgagcagcagatccgcgacatcctgcctgcctatatcggcacgatc
agccaggttccgccgcagttttccgccattaagatcgcgggcgagcgcgcctacgatctg
gcgcgcgacggcgaggcggtcgagatcccttcgcgcgaagtcgaggttcatcgtctgacg
cttctcgcctgcccggatgccaatacggcgcatttcgaggtggaatgcggcaagggtacc
tatgtgcgggcgcttgcccgcgattttggccgcgaactcggctgctacggtcatatttcc
ggcctgcgccgtaccttcgtagcacctttcgccgaggagacgatggtgccgcttgcaaaa
ctcaccgcgcttgaagagatcgaagacatcgatgagcgtcttgccgcgctcgacgccctg
ctgatcgatacctgcgaagcgctatcggccttgccacaccttgttatcagcgatgaccaa
gcgcaccggctgaagatgggcaatccgatcctggtgcggggccgcgatgcaccggttgcc
gaaagcgaagcctatgcgacggcacgcggcaggctaatcgcgatcggcgagatcggacag
ggcgaattccggccgaagcgcgtttttgcctag
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