Rhizobium sp. WYJ-E13: KQ933_20375
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Entry
KQ933_20375 CDS
T11043
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw03030
DNA replication
rhiw03410
Base excision repair
rhiw03420
Nucleotide excision repair
rhiw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ933_20375 (polA)
03410 Base excision repair
KQ933_20375 (polA)
03420 Nucleotide excision repair
KQ933_20375 (polA)
03440 Homologous recombination
KQ933_20375 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiw03032
]
KQ933_20375 (polA)
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_20375 (polA)
Enzymes [BR:
rhiw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ933_20375 (polA)
DNA replication proteins [BR:
rhiw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KQ933_20375 (polA)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KQ933_20375 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQ933_20375 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Transposase_20
HHH_2
HHH
NYN_YacP
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QWW67911
LinkDB
All DBs
Position
4126079..4129078
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLRDARSTDVAAT
PTHLAVIFDYSSKTFRKDLYDAYKANRSAPPEELVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAVGADVTIVSSDKDLMQLVTTNVHMYDSMKDKQISIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLAEYGDLDTLLERAHEIKQEKRRQTILENI
DKAKLSRELVRLRTDVPLELDLDALILEPQNGPKLIGFLKTMEFTTLTRRVAEVCNCDAS
EIEPAFVKIEWGAEAHGPDLDAAEPEPVAGTIPDVGGEAVAVPPRAKAKTAVEGMFAPAD
LAKARAEAFATLPFDHSSYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGF
SLAIADNATDPTGTRIRAAYVPISHKTGVGDLLGGGLAENQIPMRDALSRLKALLEDESI
LKVAQNLKYDYLLMKRYGIETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIAYKD
VAGSGKSNVTFDLVDIERATHYAAEDADVTLRLWMVLKPRLAATQLTRVYERLERPLVPV
LARMEERGITVDRQILSRLSGELAQGAARFEDEIYQLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYIHPETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISSPGHKLISADYSQIELRVLA
HVAEIPQLVRAFEDGIDIHAMTASEMFGVPVEGMPAEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKQMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKIEPALAEAGLADRVRMLLQVHDELIFEVEDEDV
EKAMPTIVSVMENATSPALEMRVPLRVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttccttgtcgacggttcgggcttcatcttccgggccttt
catgcattgcccccgctgacgcgcaaatccgatggcctgccggtcggcgccgtctcgggt
ttctgcaacatgctttggaagctgctgagggatgcacgcagcaccgatgtggccgccacg
ccgacccatctcgccgtcattttcgactattcgtcgaagaccttccgcaaggatctctat
gacgcctataaggcgaaccgttcggcaccgcccgaagagctggtgccacagttcggcctg
atccgcgaggcgacgcgcgccttcaatcttccctgcatcgagacggaaggtttcgaagcc
gacgatatcatcgccacctatgcccgccaggccgaagccgtcggcgccgacgtgacgatc
gtctcctccgacaaggatttgatgcagctcgtcacgaccaatgtccacatgtatgacagc
atgaaggacaagcagatcagcatccccgatgtcatcgagaaatggggtgtgccgccggaa
aagatgatcgacctgcaggccatgaccggcgattccgtcgataatgttccgggcattccg
ggcatcggtcccaagacggccgcccagcttctcgccgaatatggcgatctcgataccctt
ctcgagcgtgcccacgagatcaagcaggaaaagcgtcgccagacgattctcgaaaacatc
gacaaggcaaagctctcccgcgagctggtgcgcctgcgcaccgacgtgccgctggagctt
gacctcgacgcgctcatcctggagccgcagaacggccccaagctgatcggcttcctgaag
accatggagttcacgacgctgacgcgccgtgtcgcggaagtctgcaattgcgatgccagc
gagatcgagcctgctttcgtgaagatcgaatggggtgcggaagcgcatggcccggatctc
gatgcagccgagccggagcctgtcgcgggcactatccctgacgtaggtggcgaagccgtc
gcggttccgccgcgtgcaaaggcgaaaactgcggtcgaaggcatgtttgcgccggccgat
cttgccaaggcgcgggcagaggcttttgcgaccctgccgtttgaccattcctcctatgtg
acgatccgcgacctggcgaccctcgatcggtggatcgccgacgcgcgggacaccggcctc
gtcgccttcgatacggaaacgacctcgctcgatgccatgcaggccgagctcgtcggcttc
tccctggcgattgccgataatgcgacagacccaaccggcacacgcatccgcgccgcctac
gtgccgatcagccacaagacgggagtcggtgacctgctcggcggtgggctcgcggaaaac
cagatcccgatgcgcgacgcgctatcgcggctgaaggcgctgctggaggatgaatcgatc
ctcaaggtggcgcagaacctgaaatacgactacctgctgatgaagcgctacggcatcgag
acgaagagtttcgacgatacgatgctgatatcctatgtgctcgatgccggcacgggcgcg
cacggcatggaccccttgtctgaaaaattcctcggacacacaccgatcgcctacaaggat
gttgccggctccggcaagtccaacgtcactttcgacctcgtggatatcgagcgcgcgacc
cactacgccgcagaagacgccgacgtgacgctgcgcctctggatggtgctgaagccgcgc
cttgccgctactcagctgacgcgcgtctatgagcgtctggaacgtccgctcgtgcctgtt
ctggcgcgcatggaagaacgtggcatcacggtcgaccgccagatcctgtcgcgcctgtcg
ggcgaactggctcaaggggcagccaggttcgaggatgaaatctatcagcttgccggcgag
aggttcaacatcggctctcccaagcagctcggcgacatcctgttcggcaagatgggcctt
gccggcggcagcaagaccaagaccggccaatggtcgacctcggcaagcgtgctggaagac
ttggcggcggccggcttcgagctgccccgcaagatcgtcgactggcgccagctcactaag
ctgaagtccacctacacggatgcgcttccgggttacatccatccggaaacgaagcgggtg
cacacctcctattcactggcatcgacgacgacaggccgcctttcctcctctgagccgaac
cttcagaacattccggtccgcaccgccgaaggccgcaagattcgcaccgccttcatttca
tcgcccggccacaagctgatctcggccgactacagccagatcgagctgcgcgtgctcgcc
catgtcgctgagatcccgcagctcgtgcgcgctttcgaagacggcatcgacatccacgcc
atgaccgcctccgaaatgttcggcgttcccgtcgagggcatgccggccgaggtgcgccgc
cgcgccaaggcgatcaacttcggcatcatctacggcatttccgccttcggtctcgccaac
cagctttccatcgagcgctcggaagccggtgactatatcaagaagtatttcgagcgtttc
cccggcatccgcgattacatggaaagccgcaagcagatggcccgcgacaagggctatgtc
gagacgatcttcggccgccgaatcaattatccggaaatccgctcgtccaatccttcggtc
cgcgccttcaacgaacgtgctgccatcaacgcaccgatccagggttcggccgctgacgtc
atccggcgcgcgatgatcaagatcgaaccggcgctcgccgaggcaggccttgccgatcgg
gtgcgcatgctcttgcaggtgcacgatgaattgatcttcgaggtcgaagacgaggatgtc
gaaaaggcgatgccaacaatcgtttcggtgatggaaaatgccacctcgccggcccttgaa
atgcgcgtaccgcttagggtcgacgcacgcgccgccaccaattgggacgaggcgcattaa
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