Rhizobium sp. WYJ-E13: KQ933_21175
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Entry
KQ933_21175 CDS
T11043
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KQ933_21175 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_21175 (xseA)
Enzymes [BR:
rhiw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KQ933_21175 (xseA)
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KQ933_21175 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QWW68058
LinkDB
All DBs
Position
4278388..4279968
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AA seq
526 aa
AA seq
DB search
MSNVFDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMAL
IEERKRRLGAEGLFDPARKKRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVANAINGFNVLEPGGEIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAADS
RIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQTAGLTARLQGCMNRQ
MDQRRQSVRALMRALPSLDQLLALPRRRFDEAATGLGRGLELNTINKRRGFERVASHLRP
DVLSNRITERRQLLNERMVRAERTVERLVDRSKARIERAEAILASLPARLNTQTDRSRER
LGNLSRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEENRPVSQAAAL
SAGMGIAIEFADGRVGAMTTEGGTPPAGSKRRTAKAGEPPKQGSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtctttgacggcgattcgcctaccaatctcgcggaatattcggtctcggag
ctctccggttccatcaagcggaccgtcgagacagccttcgatcaggtgcgtgtgcgtggc
gagatttcgggctaccgtggcccccattcgtccggccatgcctatttctcgctgaaggac
gatcgggctcgcatcgatgcggtcatctggaagggcaccttttcccgcctgaagttccgt
ccggaagagggtatggaagtcatcgcgaccggcaaggtcacgaccttcccgggctcttcc
aaataccagatcgtcatcgagaccctggagcctgccggcgccggcgcgctgatggccctg
atcgaggagcgcaagcggcgcctcggtgccgagggccttttcgatcccgcgcgcaagaaa
cgcctgccgttcatgcccagggtgatcggcgtcgtcacctcgccgaccggcgccgtcatt
cgcgatatcctgcaccgtatctcggatcggtttcccgtgcatgtcgtcgtctggcccgta
aaggtgcaaggggaaggctcaggcgaggaggtggcaaacgccatcaatggcttcaacgtt
ctggaacctggcggtgagattccgcgtccggatgtgctgatcgtcgcccgcggcggcggc
agcctcgaagatctttggagcttcaacgacgaaatcgtcgtgcgtgccgcggccgatagc
cggattcccttgatctctgccgtcggccacgagacggactggacgctgatcgactacgcc
gccgatgtccgcgcgccaacgccgacgggtgccgccgaaatggccgtgcccgtcaaagct
gaactcgaagcgcagaccgcaggtctcaccgcccgcctgcaaggctgcatgaaccgccag
atggatcagcgtcgccagtccgtccgcgctttgatgcgcgccctgccgtcgctcgaccag
ctgctggcactgccccgccgccgctttgatgaggcggccactggccttggccgcgggctg
gaactcaacaccatcaataagcgccgcggtttcgagcgtgtcgcctcgcatctgcgcccg
gacgtgctgtccaaccgcatcaccgagcgtcgccagcttctgaacgagcgcatggtccgc
gcagaacgcaccgtcgagcggctggtcgaccggtcgaaggcccgcatcgagcgcgccgag
gccatcctcgcctcgctgcccgctcggctgaacacccagaccgaccgcagccgcgagcgg
ctgggcaatctttcgcgccatgccgataccgcgatccgccatcaactgacccgtgcgcgc
gccgagctctccgcacaggaccgtgtactgcaatcactttcctacaagaacgtactgaaa
cgcggttacgccgtcatccgcgacgaggaaaacaggccggtctcgcaggccgctgctctc
tccgccggcatgggtatagccatcgagttcgccgatggccgcgtcggcgccatgacgacg
gaaggcggcacgccgccggcagggtcgaagaggcgtactgccaaggccggcgagccgccg
aagcagggaagcctgttctaa
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