Rhizobium sp. WYJ-E13: KQ933_27710
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Entry
KQ933_27710 CDS
T11043
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhiw Rhizobium sp. WYJ-E13
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiw03032
]
KQ933_27710
03400 DNA repair and recombination proteins [BR:
rhiw03400
]
KQ933_27710
Enzymes [BR:
rhiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KQ933_27710
DNA replication proteins [BR:
rhiw03032
]
Prokaryotic type
DNA Topoisomerases
KQ933_27710
DNA repair and recombination proteins [BR:
rhiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQ933_27710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QWW70601
LinkDB
All DBs
Position
unnamed1:complement(1347891..1348901)
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AA seq
336 aa
AA seq
DB search
MNADVITELGLIYVSDTEPGIRRRRKGKGFSYTLPDGKTLADEIQRARIRALGLPPAYEN
VWICIDENGHLQATGYDARGRKQYRYHKDWQSFRSAGKFYQLIEFGRALPKIRRTVLHHL
DTGAEDINGVLAALTILLDEAHLRVGNQAYVKENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEISDLPGRQLFVWKDETGALKPIDSGRLNAYLADISGIAI
SAKTFRTWAGSLAAFDAVRSAVSEGRRPTVKEMSEAAAEVLHNTPAISRSSYIHPEIIAL
SATDETLEEGNTEPLRGLRANENRMLDFLTRRAVPE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgacgtcatcaccgagcttggcctgatctatgtcagcgataccgaaccgggt
attcgcagacgacgaaagggcaagggcttcagctatacgttgccggacgggaaaacactg
gccgacgaaatccagcgggcgcgcatccgcgcgctcggcttgccaccagcctacgaaaat
gtgtggatctgcattgacgagaacggtcatctgcaggcgacgggctatgatgcgcgtggc
cgcaaacagtaccgctaccacaaggattggcaatctttccgaagtgccggcaagttttat
cagctgatcgagttcggccgggcgctcccgaagatccggcgaacggtcctgcatcatctc
gataccggcgcggaagatatcaacggcgtgcttgcggcgctgacgatactgctggacgaa
gcgcatctgcgcgtcggcaaccaggcctatgtcaaggaaaacggcacctatggtgcaacg
acgctgctcaagcgccatctgaagatcgtcgatggccgtatagagctgaagttccgcgcc
aagggcggcaagcgcgtacaacgcagccttaaacatccacgcctgcagaaaatcctggag
gagatatcggaccttccaggcaggcagctcttcgtctggaaggatgagaccggcgcgctg
aagccgatcgattccggtcggctgaatgcctatcttgctgatatctcgggtattgcaatc
tctgccaagaccttccggacatgggcaggttcgctcgccgccttcgatgcggtccgaagt
gccgtgtcggaaggacgacggccgaccgtcaaggaaatgtcggaagcggcggccgaagtc
ctgcataatacgccggcgatctcgcgctccagctacatccatccggagattatcgcactt
tcggctacagacgagacgctggaggaggggaataccgagcccttgcgggggcttcgggcg
aatgagaaccgcatgctggatttcctgacgcgtcgcgccgttcccgagtga
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