Rhizobium sp. WYJ-E13: KQ933_32105
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Entry
KQ933_32105 CDS
T11043
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhiw Rhizobium sp. WYJ-E13
Pathway
rhiw00362
Benzoate degradation
rhiw00624
Polycyclic aromatic hydrocarbon degradation
rhiw01100
Metabolic pathways
rhiw01120
Microbial metabolism in diverse environments
rhiw01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhiw00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KQ933_32105 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
KQ933_32105 (pcaH)
Enzymes [BR:
rhiw01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
KQ933_32105 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
LigD_N
Motif
Other DBs
NCBI-ProteinID:
QWW72554
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Position
unnamed2:149897..150616
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AA seq
239 aa
AA seq
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MNIISPYRGDDPAAPRLLHPDYRATITRAPSRPPLLIPQTLTEMTGPAASWERLMGPSLA
DLTSQHRSPPLGQRIVVSGKVLDDRRRPVPNTVIEIWQANAAGRYIHAKDDWDAPIDENF
TGAGRVITDDEGHYRFVTIRPGAYPWGNHKNAWRPAHIHLSLLGPAFATRLVTQFYFPDD
PLIEIDPIANSVPRMYRERMVSRFDMETTVANWALGYIFDIILKGRGATPFEEHDDHDH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatttcaccttatcggggcgatgatccggccgcgccgcgactgctccatccg
gattaccgtgcgaccatcacgcgggcgccgagccgcccgcctttgctcatcccgcaaacg
ctaacggagatgaccggaccggcggcctcgtgggagcgattgatggggccatcgctcgca
gatctgacaagccaacatcgttcgcctccgctgggacaaaggatcgttgtatcgggaaag
gtactcgatgacagaaggcgacctgtgccaaacacggtaatcgaaatctggcaagccaat
gccgccggacgctatatccacgcaaaagatgactgggatgcgccgatcgacgaaaacttc
accggcgcggggcgggtaatcaccgatgacgagggccattaccgctttgtcacgatccga
ccgggggcctatccctggggcaatcacaagaatgcgtggcgccctgctcatatacactta
tcgctgctcggacctgcgtttgcgacaagactggtgacccagttttattttccggacgac
ccgctgatcgaaatcgatccgatcgccaattctgtgccgcgaatgtaccgagaaagaatg
gtttcacgcttcgatatggaaactaccgtcgccaactgggcactcggttacatatttgac
atcattttgaaggggcgcggagcaacccctttcgaggaacatgacgatcatgaccactga
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