Rhizobium sp. Y9: BLX90_00070
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Entry
BLX90_00070 CDS
T11041
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhiy Rhizobium sp. Y9
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiy03032
]
BLX90_00070
03036 Chromosome and associated proteins [BR:
rhiy03036
]
BLX90_00070
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_00070
DNA replication proteins [BR:
rhiy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BLX90_00070
Chromosome and associated proteins [BR:
rhiy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BLX90_00070
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BLX90_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
AUC08745
LinkDB
All DBs
Position
1:12907..13209
Genome browser
AA seq
100 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGESVFVEEKWVPFFKTGKELRERLNPGMGDEEDD
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatctgaactggtgcagatcgttgctgcgcgtaacccgcacctttatcaccgt
gacgtggaaaacatcgtcaatgcggtgctggatgaaatcaccgacgctctggcggcagga
aatcgtgttgagctccgcggttttggcgcgttttcggtgaaaaaccgtccgtcgcgctcg
ggccggaacccgcgcacgggtgaatcggttttcgtcgaggaaaaatgggtgcccttcttc
aagacgggtaaggaactgcgtgaacgcctgaaccccggaatgggtgacgaagaggacgat
tga
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