Rhizobium sp. Y9: BLX90_04685
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Entry
BLX90_04685 CDS
T11041
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhiy Rhizobium sp. Y9
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiy03032
]
BLX90_04685
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_04685
Enzymes [BR:
rhiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BLX90_04685
DNA replication proteins [BR:
rhiy03032
]
Prokaryotic type
DNA Topoisomerases
BLX90_04685
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLX90_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AUC09554
LinkDB
All DBs
Position
1:complement(960163..962847)
Genome browser
AA seq
894 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMSWEVDSASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDLLKKKRVLGDKPVKRVVFNAITKKAV
LDAMANPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFVSEEYWNISALLKTPRGDEFEARLVSADGKRLQNRAIKTGDDANRLKALLEGA
TYVVDSVEAKPVKRNPSPPFTTSTLQQAASSRMGFGASRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMAPEAIDAARKAIGEQFGGRYVPEKARFYSTKAKNAQEAHEAIRPTDFNR
TPDQVKRYLDADQLRLYELIWKRGIASQMASAEIERTTVEILASNGGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDDEGRLPPINERENLAKQKINASQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLKTLSDREYIVIDKRKLVPHSRGRLVTAFLESFFTKYVEYDFT
AALEEKLDRISAGELDWKQVLRDFWKDFFAQIEDTKELRVTNVLDALNEVLAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLTSDGAEAEAAALNEPKALG
ADPMTGEELTLRSGRFGPYIQRGDGKEAKRSSLPKGWKPEDIDHEKALALINLPRDIGKH
PETGKMISAGLGRYGPFLLHDGSYANLESIEDVFSIGLNRAVTVIAEKQSKGPGRGRSGT
PAALKELGDHPDGGPITVRDGRYGAYVNWGKVNATIPKGQDPASVTLDEALVLIAERIAK
TGTGGKPAKAKKTTAKKADGDAAAKPKATKAKAATKSKTAAKPKAAAKPKKAAE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtcgtcgtagaatctcctgccaaagccaagacgatcaacaagtatcttggc
tcgggctataaggttcttgcatcctttggccacgtcagggaccttcctgccaaggacgga
tcggtgttgcctgaccaggatttcgaaatgtcctgggaagttgacagcgcctccgccaag
cgcatgaaggatattgccgatgcggtaaaatcctccgacggcctctttctggcaaccgac
ccggatcgcgaaggggaagccatttcctggcacgttctcgatcttttgaagaagaagcgg
gttctcggcgacaagccggtgaagcgcgtcgtcttcaacgccatcaccaagaaagcggtg
ctggacgcgatggcgaacccgcgcgacatcgatgtgccgctggtggacgcctatctcgcc
cgccgagcgctcgactatctcgtcggcttcaacctctctccggttctgtggcgcaagctg
ccgggtgcgcgttcggccggccgggtgcagtccgtggcgctgcgtctcgtctgcgatcgc
gaatccgaaatcgagcgtttcgtttccgaagaatactggaacatcagcgcacttttgaag
acaccgcgcggtgacgagttcgaggctaggctggtttcggccgatggcaagcgattgcag
aaccgcgccatcaagaccggcgacgatgcgaaccggctgaaagcgctgctcgaaggcgcg
acctacgtggtggatagcgtcgaggcgaaacccgtcaaacgcaatcccagccctcccttt
acgacctcgacgctgcagcaggcggcttcttcgcggatgggcttcggcgcctcgcgcacc
atgcaggtggcgcagaagctttatgaaggcatcgatatcggcggcgagaccgtcggtctg
atcacctatatgcgtaccgacggcgtgcagatggccccggaagcgatcgatgctgcgcgt
aaggctattggcgagcagttcggtggccgttacgtgccggaaaaagcgcgtttctactct
accaaggccaaaaatgcgcaggaagcgcacgaggcgatccgcccgaccgatttcaaccgc
acaccggatcaggtgaagcgttacctcgatgccgaccagctgcgcctttacgagctgatc
tggaaacgcggtattgcgagccagatggcgtcagccgaaatcgagcgcacaacggttgaa
attctcgccagcaacggcggcgagaaggctggcctgcgcgccgttggctccgtcatccgc
ttcgacggctttatcgccgcttataccgaccagaaggaagatggcgagcagagcgacgat
ggtgacgacgaaggccgtctgccgccgatcaatgagcgcgagaacctcgccaagcagaag
atcaatgccagccagcacttcaccgagccgccgccgcgttattcggaagcgtcgctgatc
aagaagatggaagaactcggcatcggccgtccttccacctatgcggcaacgctgaagacg
ctgagcgaccgcgaatatatcgtcatcgacaagcgcaagctggtaccgcattcgcgtggc
cggctggtgacggctttcctcgaaagcttcttcaccaaatacgtcgagtatgatttcacc
gccgcccttgaagaaaagctcgaccgcatttccgccggcgaactggactggaagcaggtt
cttcgcgatttctggaaggatttcttcgcgcagatcgaagataccaaggaactgcgcgtc
accaacgtgctggatgcgctgaacgaggttctggcgccgctggtgttcccgaagcgcgag
gatggttccgatccgcgcatctgtcaggtttgcggcaccggcaatctgtcgctgaagctc
ggcaaatacggtgcctttgtgggttgctcgaactaccctgagtgcaactatacccgccag
ctgacctccgatggcgcggaagccgaagccgctgctctcaacgagccgaaggcgctgggc
gctgatcccatgaccggcgaggagctgacgcttcgctccggccgtttcgggccctatatc
cagcgcggtgacggcaaggaagccaagcgctcctcgctgccgaagggctggaagcctgag
gatatcgatcacgaaaaggcgttggcgctcatcaacctgccgcgcgatataggcaagcat
ccggaaaccggcaagatgatctcggctggtctaggccgttacggacctttcctgctgcat
gatggttcctatgcgaacttggagagtatcgaggacgtgttctcgatcggcctcaaccgc
gccgtgaccgtgatcgctgaaaagcagagcaagggtccgggacgcggccgtagcggcacg
ccagctgctctcaaggagttgggcgaccaccctgatggcggcccgatcaccgttcgtgac
gggcgctacggcgcctatgtgaactggggcaaggtcaacgccaccattccaaaggggcag
gatccggcatccgtgacgctggacgaggcgctcgtgttgatcgccgagcgcattgccaag
accggcaccggcggcaagcccgccaaggccaagaaaacgaccgccaagaaggccgatggt
gacgccgctgcaaagccgaaggcgaccaaggccaaggcggcgacaaagagcaagacggcc
gccaagccgaaggcagcggccaaacccaagaaggcagcagagtga
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