Rhizobium sp. Y9: BLX90_05345
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Entry
BLX90_05345 CDS
T11041
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLX90_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_05345
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLX90_05345
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BLX90_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
nSTAND1
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_33
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AUC09676
LinkDB
All DBs
Position
1:complement(1100971..1103892)
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFA
DRPLPPEETAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPS
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWSD
LSKEAQHAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINKLHIGEVTEMSIRTARDWFEVLPESLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGSPQ
EVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV
EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL
LERRPAGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaagacgatttccatccgtggtgcccgtgaacacaatctcaagggtatc
gatctcgatctgccacgcaacaagctgatcgtcatgaccgggctttccggctcaggcaag
tcgtcgctcgccttcgatacgatctacgccgaaggccagcgccgttatgtcgaaagcctc
tcggcctatgcgcgccagttcctcgaaatgatgcagaagccggatgtcgaccagatcgag
ggcctgtcgccggcaatctccatcgaacagaagaccacctcgcgcaacccgcgctccacg
gtcggcacggtcaccgagatctacgactatatgcgccttctcttcgcgcgtgtcggtgtc
ccctattcgccggccacgggcctgccgattgaaagccagacggtcagccagatggtcgac
cgcatcctcgctttcgaggaaggcacgcgtctttacatcctcgcgccgatcgtgcgcggc
cgcaaaggcgagtacaagaaagaacttgccgagctgatgaagaagggcttccagcgcgtc
aaggtggacggccagttctacgagatcgccgacgttcctgctctcgacaagaagtacaaa
cacgacattgacgtggtggttgaccgcgccgtcgtgcgcccggatatggccgcgcgtctt
gccgacagtctcgagacctgcctcaagcttgccgatggtctggcaattgccgaatttgcc
gacaggcccctgccgcccgaagagacagccgccggtggttccgccaacaagtctctcaac
gagacccatgagcgggtgctgttttcggaaaaattcgcctgccccgtttccggcttcacc
attccggaaatcgaaccgcgtctcttctccttcaacaaccccttcggcgcctgccccagc
tgcgatggccttggctcgcagcagaaggtggatgagaacctgatcgtgccggagccggcc
cgtaccctgcgtgacggggccattgctccctgggcaaaatcatcgtcgccctattacaac
cagacgctggaagcgctcggcaaagccttcggattcaagctttcgagcaagtggtccgat
ctttcgaaggaggcgcagcacgccattcttcagggcactgacgacaagatcgagttcaat
taccaggacggcgcccgctcctacaagacagtcaagaacttcgaaggcatcgtgcccaat
ctggagcggcgctggaaagagacagacagcgcctgggcgcgcgaggaaatcgagcgctat
atgtcggcagccccctgcccggcctgcgccggttaccgcctgaagccggaggcgctggcg
gtcaagatcaacaagctgcatatcggtgaagtcaccgaaatgtcgatccggacggcgcgc
gactggtttgaggtgctgccggaaagcctgaacgcgaagcagaatgaaattgccgtccgt
attctcaaggaaatccgcgaacgcctgcgattcctcaacgatgtagggctggattatctc
agcctgtcgcgcaattcgggcacgctgtcgggcggggagagccagcgtatccgtctggcc
tcgcagatcggctctggcctcaccggcgttctctacgttctcgatgagccctcgatcggc
ctgcaccagcgcgacaatgcgcgcctgctggatacgctcaaacatctgcgcgatatcggc
aacaccgtcatcgtggtcgaacatgatgaggacgccattctgacggcggattatgtggtc
gatatcggcccggcggccggtattcacggcggccaggtgattgccgaaggatccccgcag
gaagtgatggccaatccgaaatcgctgaccggcaaatatctctccggtgaactcggcgtt
gccgtgccggctgagcgccgcaaacccaagaagggccgcgagatcaaggttttcggcgca
cgcggcaacaacctgaagaatgtcacggccgctgtgccgctcggtgttttcacggccgta
accggggtttcgggtggcggcaaatccaccttcctgatcgagacgctctataaatcggcg
gcgcgcagggtcatgggcgcgcgtgaaatcccggccgaacacgaccgcatcgatggtttc
gaattcatcgacaaggtgatcgatatcgaccagtcgccgatcggacgcacgccgcgctcc
aacccggccacctataccggcgcctttacgccgatccgtgactggttcgccggcctgccg
gaagccaaggctcgtggttacgcgcccggccgtttctccttcaacgtcaagggtggccgc
tgcgaggcctgccagggcgacggggtgatcaagatcgagatgcacttcctgcctgacgtc
tacgtcacctgcgacgtctgccacggcaagcgttataaccgcgagacgctggacgtcacc
ttcaagggcaaatccatcgccgacgtgctggatatgacggttgaggagggcgtcgaattt
ttcgccgccgttcccgccgtgcgcgacaagctgcaatcgctcttcgatgtcggcctcggt
tacatcaaggtcggacagcaggccaatacgctttcaggcggcgaggcgcagcgcgtcaag
ctcgccaaggaactgtcgaagcgctcgacgggccgcacgctctatattctcgacgagccg
acgacgggcctgcatttccacgacgtcaacaagctgctcgaaatgctgcatgcgctggtg
gaacagggcaattccgtggtggtgatcgagcataatctcgaagtcatcaagacggcggac
tggatcatcgatatcgggcctgaaggcggcacgggcggcggcgaagtggtggccacgggc
acgccggaagacatcgtcaaggtggagcgttcctataccggccacttcctgaaggagctt
ctggagcgccggccggccggaaaacgggaggctgcggagtaa
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